RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ZNF641Q96N77 438 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 CATSPER2Q96P56 530 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 TAAR9Q96RI9 348 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 DDA1Q9BW61 102 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 PDCL3Q9H2J4 239 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 SUV39H2Q9H5I1 410 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 RWDD2AQ9UIY3 292 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-202ENST00000420009 NBASA2RRP1 2371 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 C2CD4BA6NLJ0 364 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 ZNF891A8MT65 544 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 RECQL5O94762 991 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 GM2AP17900 193 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CD1CP29017 333 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 SDC4P31431 198 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 TRIM23P36406 574 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 PTPN9P43378 593 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CCR10P46092 362 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 OR1D5P58170 312 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 YBEYP58557 167 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 TRA2AQ13595 282 aaKnown RBP eCLIP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 GRM3Q14832 879 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CYTH1Q15438 398 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 AMZ1Q400G9 498 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 PARP15Q460N3 678 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 NAA35Q5VZE5 725 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 NOP9Q86U38 636 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 DNAAF5Q86Y56 855 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 FAM26EQ8N5C1 309 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 IL22RA1Q8N6P7 574 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 EPS8L1Q8TE68 723 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 RXFP2Q8WXD0 754 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CPA5Q8WXQ8 436 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CENPIQ92674 756 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 NTAN1Q96AB6 310 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 NCAPGQ9BPX3 1015 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 LGR4Q9BXB1 951 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 PDFQ9HBH1 243 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 CYP4F12Q9HCS2 524 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 B3GALT1Q9Y5Z6 326 aa10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 USP9XQ93008 2570 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-202ENST00000420009 PRSS38A1L453 326 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 RASA4BC9J798 803 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 RASA4O43374 803 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 BUB1BO60566 1050 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 PRKCGP05129 697 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 FGF1P05230 155 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 MMEP08473 750 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 THRAP10827 490 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 CCNB1P14635 433 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 MMP8P22894 467 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 EPHB2P29323 1055 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 CSF2RBP32927 897 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 STAT1P42224 750 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 GPR3P46089 330 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 LIMK2P53671 638 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 SQSTM1Q13501 440 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 RAPGEF1Q13905 1077 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 LIPIQ6XZB0 460 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 NRROSQ86YC3 692 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 CAMK1DQ8IU85 385 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 CACNA2D3Q8IZS8 1091 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 UMODL1-AS1Q8N2C9 162 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 PELI3Q8N2H9 469 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 AGBL5Q8NDL9 886 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 CCDC112Q8NEF3 446 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 OR4D9Q8NGE8 314 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 JOSD2Q8TAC2 188 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 C9orf43Q8TAL5 461 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 ART4Q93070 314 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 ECHDC3Q96DC8 303 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 SLC45A3Q96JT2 553 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 TUBGCP5Q96RT8 1024 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 SPATS2LQ9NUQ6 558 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 UBA2Q9UBT2 640 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 FHOD1Q9Y613 1164 aa10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 SPTAN1Q13813 2472 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-202ENST00000420009 RHPN2P1A8MT19 583 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 WASH4PA8MWX3 477 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 B4E171 279 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 CAPN5O15484 640 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 RAD1O60671 282 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 ELFN1P0C7U0 828 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 MYCLP1P12525 358 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 ALDH4A1P30038 563 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 TSPAN7P41732 249 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 MTIF2P46199 727 aaKnown RBP10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 RGRP47804 291 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 CSNK1DP48730 415 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 MAN2A1Q16706 1144 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 CFAP58Q5T655 872 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 AFMIDQ63HM1 303 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
TNFAIP3-202ENST00000420009 CREBRFQ8IUR6 639 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms