RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TNFAIP3P21580 790 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RRM1P23921 792 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ID4P47928 161 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 STK19P49842 368 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 TPMTP51580 245 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PLK1P53350 603 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 HDAC4P56524 1084 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RPS14P62263 151 aaKnown RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RPL7AP62424 266 aaKnown RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CHRNEQ04844 493 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SULT2A1Q06520 285 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF33AQ06730 810 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 KLHL30Q0D2K2 578 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 LSAMPQ13449 338 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 AASDHQ4L235 1098 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SPDYCQ5MJ68 293 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 MANEALQ5VSG8 457 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RNF219Q5W0B1 726 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PPP1R2P3Q6NXS1 205 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ABHD17CQ6PCB6 329 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 WDR59Q6PJI9 974 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 LRRC31Q6UY01 552 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF571Q7Z3V5 609 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 TFAP2DQ7Z6R9 452 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SPPL2CQ8IUH8 684 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SLC41A1Q8IVJ1 513 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ZC3H7AQ8IWR0 971 aaKnown RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 MCOLN2Q8IZK6 566 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 OXR1Q8N573 874 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 DEFB119Q8N690 84 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CCDC185Q8N715 623 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 AGBL5Q8NDL9 886 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PIGKQ92643 395 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CENPIQ92674 756 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ALG14Q96F25 216 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RPL10LQ96L21 214 aaKnown RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PLCD4Q9BRC7 762 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 NUP58Q9BVL2 599 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ZYG11BQ9C0D3 744 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RSPH9Q9H1X1 276 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PCDH12Q9NPG4 1184 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ITM2CQ9NQX7 267 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RXFP3Q9NSD7 469 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 DLL3Q9NYJ7 618 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 WSB2Q9NYS7 404 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 MPP6Q9NZW5 540 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 IFNKQ9P0W0 207 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 IMPACTQ9P2X3 320 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF212Q9UDV6 495 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SUN2Q9UH99 717 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SLCO3A1Q9UIG8 710 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SLC25A13Q9UJS0 675 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 VPS28Q9UK41 221 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 OR51B4Q9Y5P0 310 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SPTBN2O15020 2390 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 DOCK4Q8N1I0 1966 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 NCOR2Q9Y618 2525 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 CEP192Q8TEP8 1941 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 EDDM13A0A1B0GTR0 161 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 LNP1A1A4G5 178 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TARSL2A2RTX5 802 aaKnown RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SLC30A4O14863 429 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SRGAP2O75044 1071 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 DNTTP04053 509 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TPM3P06753 285 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 RNASE1P07998 156 aaKnown RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SKILP12757 684 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SDHBP21912 280 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 FPR2P25090 351 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 OXTRP30559 389 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 ADRA1BP35368 520 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 HOXD12P35452 270 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 DPP6P42658 865 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 LIMK1P53667 647 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 OGDHQ02218 1023 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 ZBTB16Q05516 673 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SCAPQ12770 1279 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PUM1Q14671 1186 aaKnown RBP eCLIP7.07□□□□□ -1.281e-6■□□□□ 9.6
HMGN1-205ENST00000419378 ARL13BQ3SXY8 428 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TTC31Q49AM3 519 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TDRD12Q587J7 1177 aaKnown RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 C9orf64Q5T6V5 341 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF776Q68DI1 518 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PLEKHA7Q6IQ23 1121 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 DCUN1D2Q6PH85 259 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 LRSAM1Q6UWE0 723 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SETD3Q86TU7 594 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 DNAAF5Q86Y56 855 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SYT12Q8IV01 421 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 DCAF4L2Q8NA75 395 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SYN2Q92777 582 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 NTAN1Q96AB6 310 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 IQCDQ96DY2 449 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TOE1Q96GM8 510 aaKnown RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF419Q96HQ0 510 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms