RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZBTB46Q86UZ6 589 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 DHFR2Q86XF0 187 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 FIBCD1Q8N539 461 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ZC3H15Q8WU90 426 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 ZNF419Q96HQ0 510 aaPredicted RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 RPL10LQ96L21 214 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 FAM210AQ96ND0 272 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 SGIP1Q9BQI5 828 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ACBD6Q9BR61 282 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 TRIM8Q9BZR9 551 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 UPF3AQ9H1J1 476 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 ATP13A1Q9HD20 1204 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 C8orf4Q9NR00 106 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 RBM22Q9NW64 420 aaKnown RBP eCLIP9.83□□□□□ -0.84
CD44-206ENST00000415148 CCDC167Q9P0B6 97 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 CNOT6Q9ULM6 557 aaKnown RBP9.83□□□□□ -0.84
CD44-206ENST00000415148 SLC8A2Q9UPR5 921 aa9.83□□□□□ -0.84
CD44-206ENST00000415148 ZNF839A8K0R7 811 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 WASH4PA8MWX3 477 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 DLGAP1O14490 977 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 IRAK2O43187 625 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 SLC7A4O43246 635 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CLIC3O95833 236 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 MYL3P08590 195 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 FGF4P08620 206 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CCDC166P0CW27 439 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 TSPAN8P19075 237 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 PAX3P23760 479 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CDK9P50750 372 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 STX1BP61266 288 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 PRAMEP78395 509 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 NFKB2Q00653 900 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 PLEKHG4BQ96PX9 1271 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CYP2S1Q96SQ9 504 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 OLFM1Q99784 485 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 DCUN1D5Q9BTE7 237 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 MUC3BQ9H195 1237 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 SLC25A51Q9H1U9 297 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 GSTO2Q9H4Y5 243 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 TMEM165Q9HC07 324 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CYP4F12Q9HCS2 524 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 ABCC13Q9NSE7 274 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 OSER1Q9NX31 292 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 PTBP2Q9UKA9 531 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 CDC14AQ9UNH5 594 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 VWA7Q9Y334 891 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 NDUFAF1Q9Y375 327 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 GMEB1Q9Y692 573 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 DYTNA2CJ06 578 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 FAM149AA5PLN7 773 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 SAC3D1A6NKF1 404 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 C9JVG2 144 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 TREHO43280 583 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 HTRA2O43464 458 aaPredicted RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 ATP6V1G1O75348 118 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 WISP3O95389 354 aaPredicted RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 BMP10O95393 424 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 HLA-DQB2P05538 268 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 HOXB8P17481 243 aaPredicted RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 CCR1P32246 355 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 MAGEA10P43363 369 aaPredicted RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 RBM20Q5T481 1227 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 INTS11Q5TA45 600 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 HECTD2Q5U5R9 776 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 KDELC1Q6UW63 502 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CLYBLQ8N0X4 340 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 MFSD2AQ8NA29 543 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 OR2T34Q8NGX1 318 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 OR2T3Q8NH03 318 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 ZFP42Q96MM3 310 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 TRIM15Q9C019 465 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 SIK2Q9H0K1 926 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CLK4Q9HAZ1 481 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 FBRSL1Q9HCM7 1045 aaKnown RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 VPS45Q9NRW7 570 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 CCM2LQ9NUG4 571 aaPredicted RBP9.82□□□□□ -0.84
CD44-206ENST00000415148 SH3BP1Q9Y3L3 701 aa9.82□□□□□ -0.84
CD44-206ENST00000415148 TRIM64CA6NLI5 447 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 PMPCBO75439 489 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 PAGE1O75459 146 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 C7P10643 843 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 IMPDH2P12268 514 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ATP6V1B2P21281 511 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 GPX3P22352 226 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 YWHAQP27348 245 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 SERPINH1P50454 418 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 PSMD7P51665 324 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CLCNKBP51801 687 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 PLK1P53350 603 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 WNT3AP56704 352 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 MAP7D1Q3KQU3 841 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 NHSL2Q5HYW2 709 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ZNF678Q5SXM1 525 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ARTNQ5T4W7 220 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 KRT80Q6KB66 452 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ZBTB49Q6ZSB9 765 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms