RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CELA2BP08218 269 aaPredicted RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 CCNB1P14635 433 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 TSHRP16473 764 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 LHCGRP22888 699 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 VIPR1P32241 457 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 HK3P52790 923 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 DSC2Q02487 901 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 ITKQ08881 620 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 ACOX1Q15067 660 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 ALG1LQ6GMV1 187 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 TIGD7Q6NT04 549 aaPredicted RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 ZCCHC8Q6NZY4 707 aaKnown RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 ENPP7Q6UWV6 458 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 HID1Q8IV36 788 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.75■□□□□ 0.43
LSM5-204ENST00000409909 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 ARRDC2Q8TBH0 407 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 SCRN2Q96FV2 425 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 TBATAQ96M53 351 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 SMIM14Q96QK8 99 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 MCCC1Q96RQ3 725 aaPredicted RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 IL12RB2Q99665 862 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 POLR1EQ9GZS1 481 aaKnown RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 SALL4Q9UJQ4 1053 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 PPIL1Q9Y3C6 166 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 TMEM202A6NGA9 273 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 ZNF487B1APH4 448 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 YY2O15391 372 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 FZD6O60353 706 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 HEXIM1O94992 359 aaKnown RBP17.74■□□□□ 0.43
LSM5-204ENST00000409909 LCA5LO95447 670 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 CTPS1P17812 591 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 MX2P20592 715 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 HNF1BP35680 557 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 TRIM23P36406 574 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 SRP54P61011 504 aaKnown RBP17.74■□□□□ 0.43
LSM5-204ENST00000409909 E2F1Q01094 437 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 CYP4F3Q08477 520 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 NIPAL4Q0D2K0 466 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 FAM182AQ5T1J6 154 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 ARMC12Q5T9G4 340 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 LRRC38Q5VT99 294 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 SLC9A4Q6AI14 798 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 PNCKQ6P2M8 343 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 HSD11B1LQ7Z5J1 315 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 TSPAN33Q86UF1 283 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 HDAC11Q96DB2 347 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 LGMNQ99538 433 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 BOCQ9BWV1 1114 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 LGR4Q9BXB1 951 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 TFR2Q9UP52 801 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 ZFYVE26Q68DK2 2539 aa17.74■□□□□ 0.43
LSM5-204ENST00000409909 OPA1O60313 960 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 HLA-DQB2P05538 268 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 GP1BAP07359 652 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 ALPIP09923 528 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 TNNT1P13805 278 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 COMTP21964 271 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 HTR1BP28222 390 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 ETV3P41162 512 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 SLC1A1P43005 524 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 MAGEA1P43355 309 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 ZNF75DP51815 510 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 TCEA2Q15560 299 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 CDKN3Q16667 212 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 DENND2CQ68D51 928 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 ESRP1Q6NXG1 681 aaKnown RBP17.73■□□□□ 0.43
LSM5-204ENST00000409909 RD3Q7Z3Z2 195 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 VSIG1Q86XK7 387 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 CACTIN-AS1Q8N1I8 211 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 DCBLD1Q8N8Z6 715 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 CCNYQ8ND76 341 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 TPCN2Q8NHX9 752 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 OR1E3Q8WZA6 343 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 RNF25Q96BH1 459 aaPredicted RBP17.73■□□□□ 0.43
LSM5-204ENST00000409909 PDXPQ96GD0 296 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 WDR92Q96MX6 357 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 DKK4Q9UBT3 224 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 KLQ9UEF7 1012 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 AMACRQ9UHK6 382 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 TTLL3Q9Y4R7 772 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
LSM5-204ENST00000409909 RP1P56715 2156 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 CPED1A4D0V7 1026 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 KCNK1O00180 336 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 RASGRP1O95267 797 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 PRLP01236 227 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 JCHAINP01591 159 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 KRT1P04264 644 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 ANXA6P08133 673 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 HOXC4P09017 264 aaPredicted RBP17.72■□□□□ 0.43
LSM5-204ENST00000409909 CYP2A6P11509 494 aaPredicted RBP17.72■□□□□ 0.43
LSM5-204ENST00000409909 CES1P23141 567 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 BLKP51451 505 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 DUSP3P51452 185 aaPredicted RBP17.72■□□□□ 0.43
LSM5-204ENST00000409909 HADHBP55084 474 aaKnown RBP17.72■□□□□ 0.43
LSM5-204ENST00000409909 KIAA1024LP59773 190 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 PPIDQ08752 370 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms