RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MPP1Q00013 466 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PDE1BQ01064 536 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 IL9RQ01113 521 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 BCL2L1Q07817 233 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 THOC5Q13769 683 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 GRM3Q14832 879 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CDKN3Q16667 212 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PTPRNQ16849 979 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TYSND1Q2T9J0 566 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MYLK3Q32MK0 819 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CARD16Q5EG05 197 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ARMC12Q5T9G4 340 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TRIM68Q6AZZ1 485 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF470Q6ECI4 717 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 LVRNQ6Q4G3 990 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 GLT6D1Q7Z4J2 308 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CILP2Q8IUL8 1156 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MFSD6LQ8IWD5 586 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 DENND6AQ8IWF6 608 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 OR13C4Q8NGS5 318 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MGARPQ8TDB4 240 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PTPRN2Q92932 1015 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ELSPBP1Q96BH3 223 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 RMDN1Q96DB5 314 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MSLNLQ96KJ4 702 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 LYSMD1Q96S90 227 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TNKS2Q9H2K2 1166 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF576Q9H609 170 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ATP13A3Q9H7F0 1226 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PCMTD2Q9NV79 361 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 FBXO5Q9UKT4 447 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 A0A0J9YYE9 177 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TSPAN11A1L157 253 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CAPN8A6NHC0 703 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TRIM24O15164 1050 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 GLRA3O75311 464 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TULP3O75386 442 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PIGNO95427 931 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TRBC1P01850 177 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 POLR2EP19388 210 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TAC1P20366 129 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 LPOP22079 712 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 SERPINA4P29622 427 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 FOXN2P32314 431 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 SMAD1Q15797 465 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 DBN1Q16643 649 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TANGO2Q6ICL3 276 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 LCA5Q86VQ0 697 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZSWIM9Q86XI8 627 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CAMK1DQ8IU85 385 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 NDUFAF2Q8N183 169 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 KDM1BQ8NB78 822 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ACVR1CQ8NER5 493 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 HDAC10Q969S8 669 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CDKN2AIPNLQ96HQ2 116 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 TBATAQ96M53 351 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF641Q96N77 438 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MYADMQ96S97 322 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CCT8L2Q96SF2 557 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 APOL5Q9BWW9 433 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 VPS11Q9H270 941 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ECT2Q9H8V3 914 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZFP14Q9HCL3 533 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MLXIPLQ9NP71 852 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 THG1LQ9NWX6 298 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 EMCNQ9ULC0 261 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CORO1CQ9ULV4 474 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF711Q9Y462 761 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 A0A1W2PQ67 120 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CCDC162PA2VCL2 907 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 OTOL1A6NHN0 477 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 C2orf81A6NN90 581 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 POP4O95707 220 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 S1PR4O95977 384 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 GOT2P00505 430 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PIRTP0C851 137 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 SLC8A1P32418 973 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 HMGCLP35914 325 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 LTBRP36941 435 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CLCN5P51795 746 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CCNHP51946 323 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 CTBP1Q13363 440 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 DLG2Q15700 870 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ATAT1Q5SQI0 421 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 AFTPHQ6ULP2 937 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 KYAT3Q6YP21 454 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MICALCLQ6ZW33 695 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 NAT16Q8N8M0 369 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 OR2A12Q8NGT7 310 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 GDAP1Q8TB36 358 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF473Q8WTR7 871 aaKnown RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 SMIM14Q96QK8 99 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MCCC1Q96RQ3 725 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 POLR3BQ9NW08 1133 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 IL17CQ9P0M4 197 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 MARCH4Q9P2E8 410 aaPredicted RBP5.53□□□□□ -1.52
EPHA4-202ENST00000409854 SUN2Q9UH99 717 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 DCDC2Q9UHG0 476 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms