RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 MAPK8P45983 427 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 CLCN5P51795 746 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 ZNF140P52738 457 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 POU4F1Q01851 419 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 ZP2Q05996 745 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 CHI3L2Q15782 390 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 FASTKD1Q53R41 847 aaKnown RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 RNF187Q5TA31 235 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 SLC41A1Q8IVJ1 513 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 PLD6Q8N2A8 252 aaKnown RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 OTUD6BQ8N6M0 293 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 ZNF557Q8N988 423 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 LPCAT1Q8NF37 534 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 ZNF398Q8TD17 642 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 CCT6BQ92526 530 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 DNAJC1Q96KC8 554 aaKnown RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 TBATAQ96M53 351 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 MYADMQ96S97 322 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 NLE1Q9NVX2 485 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 TBC1D14Q9P2M4 693 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 SPO11Q9Y5K1 396 aa14.13□□□□□ -0.15
LIMS2-206ENST00000409754 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-206ENST00000409754 ANKRD66B4E2M5 251 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 K7ERQ8 282 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 FZD6O60353 706 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 PRAMEF12O95522 483 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 PIRTP0C851 137 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TROVE2P10155 538 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 STMN1P16949 149 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 RAB10P61026 200 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TMPRSS15P98073 1019 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 CES5AQ6NT32 575 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 RAPH1Q70E73 1250 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TRPM8Q7Z2W7 1104 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 GLT6D1Q7Z4J2 308 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 MFSD6LQ8IWD5 586 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 OTUB2Q96DC9 234 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 C7orf26Q96N11 449 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 C1QTNF1Q9BXJ1 281 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 FBXO6Q9NRD1 293 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 HACD3Q9P035 362 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 INTS6Q9UL03 887 aaKnown RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 C2orf81A6NN90 581 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 SMAD6O43541 496 aaKnown RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 GOT2P00505 430 aaKnown RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 APOA4P06727 396 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 SLC35E2BP0CK96 405 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ALDH3A1P30838 453 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 MTHFRP42898 656 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 CORO7P57737 925 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 IRX4P78413 519 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 IRF9Q00978 393 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 BST1Q10588 318 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 PCLAFQ15004 111 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 LACTB2Q53H82 288 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ATXN7L2Q5T6C5 722 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 MRNIPQ6NTE8 343 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TMEM25Q86YD3 366 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 NPAS3Q8IXF0 933 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 GPATCH11Q8N954 259 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ST13P5Q8NFI4 369 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 MDGA1Q8NFP4 955 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 OR13C4Q8NGS5 318 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 C10orf82Q8WW14 230 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 SCG3Q8WXD2 468 aaKnown RBP14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ING5Q8WYH8 240 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 IRF7Q92985 503 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ELMO2Q96JJ3 720 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TSNARE1Q96NA8 513 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 SPHK2Q9NRA0 654 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ZNF358Q9NW07 568 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 COPG2Q9UBF2 871 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 MID2Q9UJV3 735 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 ACOT9Q9Y305 439 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 USH1CQ9Y6N9 552 aa14.12□□□□□ -0.15
LIMS2-206ENST00000409754 A0A087X1B8 175 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 CCDC162PA2VCL2 907 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 C2CD4DB7Z1M9 353 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 CCL22O00626 93 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 AURKAO14965 403 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 CD3EAPO15446 510 aaKnown RBP14.11□□□□□ -0.15
LIMS2-206ENST00000409754 PHGDHO43175 533 aaKnown RBP14.11□□□□□ -0.15
LIMS2-206ENST00000409754 SNNO75324 88 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-206ENST00000409754 S1PR4O95977 384 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 SAT1P21673 171 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 LPOP22079 712 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-206ENST00000409754 WEE1P30291 646 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 HLA-FP30511 346 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 GMPRP36959 345 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 SLC12A2P55011 1212 aa14.11□□□□□ -0.15
LIMS2-206ENST00000409754 TAS2R39P59534 338 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms