RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PDFQ9HBH1 243 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 SIRPGQ9P1W8 387 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 OR1A2Q9Y585 309 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 CENPEQ02224 2701 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 CFAP69A5D8W1 941 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ARHGAP42A6NI28 874 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 PLD2O14939 933 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 PRAMEF11O60813 436 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 PCCBP05166 539 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 DESP17661 470 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ITGB6P18564 788 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 MMP12P39900 470 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CSNK1DP48730 415 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 PAPOLAP51003 745 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 TPI1P60174 286 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 UBXN1Q04323 297 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 TLE1Q04724 770 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CLN3Q13286 438 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 MTM1Q13496 603 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 TCEA2Q15560 299 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CFAP58Q5T655 872 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ACAD10Q6JQN1 1059 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CCDC81Q6ZN84 652 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 RAB11FIP2Q7L804 512 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 B3GNT8Q7Z7M8 397 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 SRLQ86TD4 932 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ZSWIM9Q86XI8 627 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CAMK1DQ8IU85 385 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 MCOLN2Q8IZK6 566 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 FBXO39Q8N4B4 442 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ANKRD20A12PQ8NF67 263 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 EXTL1Q92935 676 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 CELF6Q96J87 481 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 WDR92Q96MX6 357 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 TUBGCP5Q96RT8 1024 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 RBM15Q96T37 977 aaKnown RBP eCLIP9.22□□□□□ -0.939e-7■■■■□ 19.6
NIF3L1-203ENST00000409129 SLC39A8Q9C0K1 460 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 STRADBQ9C0K7 418 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRN3Q9H3W5 708 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 STARD5Q9NSY2 213 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 KLQ9UEF7 1012 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 PCDHGA7Q9Y5G6 932 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 DGKBQ9Y6T7 804 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 LRBAP50851 2863 aa9.22□□□□□ -0.93
NIF3L1-203ENST00000409129 A0A1W2PQM1 296 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 LRRC10BA6NIK2 292 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 LGALS16A8MUM7 142 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 D6RAR5 112 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 EEF2KO00418 725 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 EFSO43281 561 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 PALMO75781 387 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 RECQL5O94762 991 aaPredicted RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 PRKCGP05129 697 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 RPLP0P05388 317 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 HOXC4P09017 264 aaPredicted RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 FAM87AP0C7U9 286 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 CCDC172P0C7W6 258 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 CDK11BP21127 795 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 SERPINA4P29622 427 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 SLC5A2P31639 672 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 UGT1A5P35504 534 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 RGRP47804 291 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 INHBCP55103 352 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 OGDHQ02218 1023 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 NSUN2Q08J23 767 aaKnown RBP eCLIP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 ZSCAN23Q3MJ62 389 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 KCTD16Q68DU8 428 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 PLA2G15Q8NCC3 412 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 GPR156Q8NFN8 814 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 FUBP1Q96AE4 644 aaKnown RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 TMEM74Q96NL1 305 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 ERGIC2Q96RQ1 377 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 CCNL2Q96S94 520 aaPredicted RBP9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 FOXP3Q9BZS1 431 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 LMBRD1Q9NUN5 540 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 GPATCH2LQ9NWQ4 482 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 AP4E1Q9UPM8 1137 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 MAN2B2Q9Y2E5 1009 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 FBN2P35556 2912 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.94
NIF3L1-203ENST00000409129 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 BLACEA4D250 179 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 EIF3CLB5ME19 914 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 CACNB4O00305 520 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 DAPK3O43293 454 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 NOBOXO60393 691 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 ELFN1P0C7U0 828 aa9.2□□□□□ -0.94
NIF3L1-203ENST00000409129 PNLIPP16233 465 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms