RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 TBC1D3Q8IZP1 549 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 SMIM14Q96QK8 99 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 LYSMD1Q96S90 227 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 KDM4CQ9H3R0 1056 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ZFYVE1Q9HBF4 777 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 PRMT8Q9NR22 394 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ZNF711Q9Y462 761 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 MAD1L1Q9Y6D9 718 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 CCDC163A0A0D9SF12 145 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 HEATR9A2RTY3 570 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 PRR23AA6NEV1 266 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 NPIPB15A6NHN6 443 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 PRR33A8MZF0 331 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 AREL1O15033 823 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 GPR37L1O60883 481 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 NDUFS2O75306 463 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ELFN1P0C7U0 828 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ZNF30P17039 623 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ADRA1DP25100 572 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 CD6P30203 668 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 MMP12P39900 470 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ADPRHP54922 357 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 PTPRRQ15256 657 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 TAF1AQ15573 450 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 TMEM52BQ4KMG9 183 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 CRTC1Q6UUV9 634 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ZDHHC24Q6UX98 284 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 CCDC25Q86WR0 208 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 FMO2Q99518 471 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 WRAP53Q9BUR4 548 aaKnown RBP15.78■□□□□ 0.12
CDPF1-204ENST00000404744 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 PREBQ9HCU5 417 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 CD93Q9NPY3 652 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 FBXO4Q9UKT5 387 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 NFU1Q9UMS0 254 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 ITM2BQ9Y287 266 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
CDPF1-204ENST00000404744 MAGEB16A2A368 324 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 H0Y858 1186 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TP73O15350 636 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 LZTS3O60299 673 aaPredicted RBP15.77■□□□□ 0.11
CDPF1-204ENST00000404744 CLDN7O95471 211 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 IGLV3-19P01714 112 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TUBBP07437 444 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 DHX9Q08211 1270 aaKnown RBP15.77■□□□□ 0.11
CDPF1-204ENST00000404744 PDIA2Q13087 525 aaKnown RBP15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TMEM31Q5JXX7 168 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 FNBP1LQ5T0N5 605 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 LRRC66Q68CR7 880 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 NEK5Q6P3R8 708 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 LYSMD3Q7Z3D4 306 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TSPAN33Q86UF1 283 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 OR2T34Q8NGX1 318 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 RLN3Q8WXF3 142 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 FAM131CQ96AQ9 280 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TOE1Q96GM8 510 aaKnown RBP15.77■□□□□ 0.11
CDPF1-204ENST00000404744 PWWP2AQ96N64 755 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 RANBP9Q96S59 729 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 ZDHHC18Q9NUE0 388 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 PKP3Q9Y446 797 aa15.77■□□□□ 0.11
CDPF1-204ENST00000404744 TRIOO75962 3097 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 EIF3HO15372 352 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 STX7O15400 261 aaKnown RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 MAP3K13O43283 966 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 SEMA4FO95754 770 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 LPOP22079 712 aaPredicted RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 ACSL1P33121 698 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 FNTBP49356 437 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 LIG3P49916 1009 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 TAS2R38P59533 333 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 RPS21P63220 83 aaKnown RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 CRADDP78560 199 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 ACOX1Q15067 660 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 CCDC38Q502W7 563 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 KIAA1161Q6NSJ0 714 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 LIPIQ6XZB0 460 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 SLC36A4Q6YBV0 504 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 NLRP9Q7RTR0 991 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 WDR5BQ86VZ2 330 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 LONP2Q86WA8 852 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 EIF1ADQ8N9N8 165 aaKnown RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 PTCD2Q8WV60 388 aaKnown RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 LRRC39Q96DD0 335 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 SYBUQ9NX95 663 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
CDPF1-204ENST00000404744 PKD2L2Q9NZM6 624 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 RAPGEFL1Q9UHV5 662 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 GGT7Q9UJ14 662 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 TCAF1Q9Y4C2 921 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 ARL5AQ9Y689 179 aa15.76■□□□□ 0.11
CDPF1-204ENST00000404744 IGHV1OR15-9A0A0B4J2B8 117 aa15.75■□□□□ 0.11
CDPF1-204ENST00000404744 PSMD11O00231 422 aa15.75■□□□□ 0.11
CDPF1-204ENST00000404744 AURKAO14965 403 aa15.75■□□□□ 0.11
CDPF1-204ENST00000404744 MMP20O60882 483 aa15.75■□□□□ 0.11
CDPF1-204ENST00000404744 RNGTTO60942 597 aaKnown RBP15.75■□□□□ 0.11
CDPF1-204ENST00000404744 TM7SF2O76062 418 aa15.75■□□□□ 0.11
CDPF1-204ENST00000404744 LHCGRP22888 699 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms