RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 DNAJB13P59910 316 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 MRPS6P82932 125 aaKnown RBP19.58■□□□□ 0.73
COL13A1-205ENST00000398978 DDR2Q16832 855 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 CILP2Q8IUL8 1156 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 CHERPQ8IWX8 916 aaKnown RBP19.58■□□□□ 0.73
COL13A1-205ENST00000398978 DDIASQ8IXT1 998 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 BLOC1S5Q8TDH9 187 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 HTTP42858 3142 aa19.58■□□□□ 0.73
COL13A1-205ENST00000398978 USP46P62068 366 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 FSCN1Q16658 493 aaKnown RBP19.58■□□□□ 0.72
COL13A1-205ENST00000398978 UNC50Q53HI1 259 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 OVOS1Q6IE37 1185 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 SCIMPQ6UWF3 145 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 ISCA2Q86U28 154 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 SPPL2CQ8IUH8 684 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 TSPAN14Q8NG11 270 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 B3GALT6Q96L58 329 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 SLC2A11Q9BYW1 496 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 EML4Q9HC35 981 aaKnown RBP19.58■□□□□ 0.72
COL13A1-205ENST00000398978 HSFX1Q9UBD0 423 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 UXTQ9UBK9 157 aaPredicted RBP19.58■□□□□ 0.72
COL13A1-205ENST00000398978 SUCOQ9UBS9 1254 aaKnown RBP19.58■□□□□ 0.72
COL13A1-205ENST00000398978 V9GYQ6 96 aa19.58■□□□□ 0.72
COL13A1-205ENST00000398978 M0QZ92 97 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 RPL26P61254 145 aaKnown RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 PLOD1Q02809 727 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 PFKFB4Q16877 469 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 KRT80Q6KB66 452 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 FAM171BQ6P995 826 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 RTL3Q8N8U3 475 aaKnown RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 PIF1Q9H611 641 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 FNDC3AQ9Y2H6 1198 aaKnown RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 MT-ND1P03886 318 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 APOFQ13790 326 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 GALNT3Q14435 633 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 MANEALQ5VSG8 457 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 GDF6Q6KF10 455 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 ZBTB49Q6ZSB9 765 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 METTL23Q86XA0 190 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 MIB1Q86YT6 1006 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 PTGR2Q8N8N7 351 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 RNF217Q8TC41 542 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 GTF3C2Q8WUA4 911 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 C19orf60Q96EN9 201 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 SMIM14Q96QK8 99 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 MID1IP1Q9NPA3 183 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 RGS18Q9NS28 235 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 ARHGAP10A1A4S6 786 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 SOAT2O75908 522 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 LINC00032P0C843 101 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 PURAQ00577 322 aaKnown RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 MAP7D1Q3KQU3 841 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 CD300LGQ6UXG3 332 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 USP50Q70EL3 339 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 DCBLD1Q8N8Z6 715 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 UTP6Q9NYH9 597 aaKnown RBP19.57■□□□□ 0.72
COL13A1-205ENST00000398978 DNAJC15Q9Y5T4 150 aa19.57■□□□□ 0.72
COL13A1-205ENST00000398978 KLHL33A6NCF5 533 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 PEX11BO96011 259 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 PYGLP06737 847 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 C8BP07358 591 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 GRK4P32298 578 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 LEPRP48357 1165 aaKnown RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 CPT1AP50416 773 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 KPNA2P52292 529 aaKnown RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 SEMA3AQ14563 771 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 PSMD5Q16401 504 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 SIRPB2Q5JXA9 342 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF678Q5SXM1 525 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 DHFR2Q86XF0 187 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 SPATA2LQ8IUW3 424 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 OR13C4Q8NGS5 318 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 TRPC4APQ8TEL6 797 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 UBXN10Q96LJ8 280 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 ACBD6Q9BR61 282 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 ABCC13Q9NSE7 274 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 PTTG2Q9NZH5 202 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 CD300AQ9UGN4 299 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 A0A0J9YYE9 177 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 NCF1BA6NI72 391 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 NCF1CA8MVU1 366 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 PIP5K1BO14986 540 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 S1PR4O95977 384 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 NCF1P14598 390 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 DNAJB2P25686 324 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 EIF4EBP2Q13542 120 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 SLC39A12Q504Y0 691 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 LARP4Q71RC2 724 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL13A1-205ENST00000398978 KLHDC8BQ8IXV7 354 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 NUP93Q8N1F7 819 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 FAM47BQ8NA70 645 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 IRGQQ8WZA9 623 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 ESAMQ96AP7 390 aa19.56■□□□□ 0.72
COL13A1-205ENST00000398978 NME4O00746 187 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 MMP2P08253 660 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 NDST2P52849 883 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 OR4D1Q15615 310 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 FAM110CQ1W6H9 321 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 LRRC23Q53EV4 343 aaPredicted RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 LCA5Q86VQ0 697 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms