RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RTN4RL1Q86UN2 441 aaPredicted RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 NMD3Q96D46 503 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 PGAP3Q96FM1 320 aaPredicted RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 IL12RB2Q99665 862 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 STN1Q9H668 368 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 VPS28Q9UK41 221 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CORO1CQ9ULV4 474 aaPredicted RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 ANGPTL3Q9Y5C1 460 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 SAC3D1A6NKF1 404 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF839A8K0R7 811 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 IQCF5A8MTL0 148 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 CA12O43570 354 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 GJB5O95377 273 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 LYNP07948 512 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ATP5C1P36542 298 aaKnown RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF135P52742 658 aaPredicted RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 KRT80Q6KB66 452 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 RP9Q8TA86 221 aaKnown RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ACTRT2Q8TDY3 377 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 AUTS2Q8WXX7 1259 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ERLEC1Q96DZ1 483 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 MYEOVQ96EZ4 313 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 UBA2Q9UBT2 640 aaPredicted RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 VTI1BQ9UEU0 232 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 TLR6Q9Y2C9 796 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 RNF103-CHMP3A0A140T963 221 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF623O75123 536 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 TRIM16O95361 564 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 LINGO3P0C6S8 592 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 MBL2P11226 248 aaPredicted RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 PIK3CGP48736 1102 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 CLCN5P51795 746 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC7A2P52569 658 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 TSTA3Q13630 321 aaPredicted RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 VPS26BQ4G0F5 336 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 STXBP5Q5T5C0 1151 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 KIAA0930Q6ICG6 404 aaPredicted RBP10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 RANBP10Q6VN20 620 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 OR4L1Q8NH43 312 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 DNAJB14Q8TBM8 379 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 SH3RF2Q8TEC5 729 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 PFDN4Q9NQP4 134 aa10.46□□□□□ -0.73
CPSF1P1-201ENST00000397477 CDKN1CP49918 316 aaPredicted RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 C1QTNF8P60827 252 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 STX5Q13190 355 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 TSNQ15631 228 aaKnown RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 RTP2Q5QGT7 225 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 C6orf52Q5T4I8 152 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 RNF219Q5W0B1 726 aaPredicted RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 FUT10Q6P4F1 479 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 TAS1R1Q7RTX1 841 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 CCDC117Q8IWD4 279 aaPredicted RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 FBXO39Q8N4B4 442 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 CDC26Q8NHZ8 85 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 UROC1Q96N76 676 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 ZMYM5Q9UJ78 669 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.74
CPSF1P1-201ENST00000397477 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLCO1B7G3V0H7 640 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 ENPP3O14638 875 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SNAP91O60641 907 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 HGFP14210 728 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 EEF1DP29692 281 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC11A1P49279 550 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 FOLH1Q04609 750 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PAQR3Q6TCH7 311 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 C2CD4AQ8NCU7 369 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 RNF217Q8TC41 542 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 JADE3Q92613 823 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 TSGA13Q96PP4 275 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 GPR21Q99679 349 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 Q9H521 79 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CLIC5Q9NZA1 410 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 NPEPPSL1A6NEC2 478 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 C2orf81A6NN90 581 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 M0QZQ0 153 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 RNASEH1O60930 286 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 IL1BP01584 269 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 VCLP18206 1134 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 GRIA3P42263 894 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 ARCN1P48444 511 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 MS4A2Q01362 244 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CEACAM7Q14002 265 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMCO4Q5TGY1 634 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 FAM43BQ6ZT52 329 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 MRPL10Q7Z7H8 261 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMEM173Q86WV6 379 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CILP2Q8IUL8 1156 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PQLC1Q8N2U9 271 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CDK15Q96Q40 435 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PRPF18Q99633 342 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 UPF3AQ9H1J1 476 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CAAP1Q9H8G2 361 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 LATS2Q9NRM7 1088 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms