RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RPP40O75818 363 aaKnown RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 PRAMEF12O95522 483 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TIMP1P01033 207 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 LAG3P18627 525 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TSPAN8P19075 237 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 POLD2P49005 469 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 SLC25A3Q00325 362 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 ACVR1Q04771 509 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TRAF2Q12933 501 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TECRLQ5HYJ1 363 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 SETD3Q86TU7 594 aaPredicted RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 RYBPQ8N488 228 aaPredicted RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 EFHBQ8N7U6 833 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 OR4L1Q8NH43 312 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 RDH11Q8TC12 318 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 KCNV2Q8TDN2 545 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 MCUR1Q96AQ8 359 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TMA16Q96EY4 203 aaKnown RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 UBXN10Q96LJ8 280 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 MRPL57Q9BQC6 102 aaKnown RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 FEM1AQ9BSK4 669 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TDRD1Q9BXT4 1180 aaKnown RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 ALG9Q9H6U8 611 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 HSFX1Q9UBD0 423 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 SPECC1L-ADORA2AF8WAN1 911 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 MATN2O00339 956 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 GPR39O43194 453 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 LILRB3O75022 631 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 FGF18O76093 207 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 LTA4HP09960 611 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 RAG1P15918 1043 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 PGM1P36871 562 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 CSKP41240 450 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 RPL14P50914 215 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 MTA1Q13330 715 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 KPNB1Q14974 876 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 CHST9Q7L1S5 443 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 APCDD1Q8J025 514 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 NAT14Q8WUY8 206 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 SREK1Q8WXA9 508 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 VPS28Q9UK41 221 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 RAP2CQ9Y3L5 183 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 ZBBXA8MT70 800 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 HNRNPCL1O60812 293 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 GKP32189 559 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 MXRA7P84157 204 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 FAM83EQ2M2I3 478 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 TMEM198Q66K66 360 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 TPGS1Q6ZTW0 290 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 GLT6D1Q7Z4J2 308 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 HERC6Q8IVU3 1022 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 SIKE1Q9BRV8 207 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 TACO1Q9BSH4 297 aaKnown RBP15.1■□□□□ 0.01
GPC3-202ENST00000394299 THTPAQ9BU02 230 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 TM6SF2Q9BZW4 377 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 CATSPERZQ9NTU4 200 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 MID2Q9UJV3 735 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 C5orf42Q9H799 3197 aa15.1■□□□□ 0.01
GPC3-202ENST00000394299 AOC1P19801 751 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 CCND1P24385 295 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 ZNF140P52738 457 aaPredicted RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 TSNAXIP1Q2TAA8 658 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 RALGPS1Q5JS13 557 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 TMPRSS6Q8IU80 811 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 EFCAB3Q8N7B9 438 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 EXT2Q93063 718 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 PTERQ96BW5 349 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 MARK4Q96L34 752 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 GALPQ9UBC7 116 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 VPS51Q9UID3 782 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 PLA2G4CQ9UP65 541 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 UBA6A0AVT1 1052 aaPredicted RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 A8MT66 165 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 SMAD6O43541 496 aaKnown RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 SORBS2O94875 1100 aaKnown RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 ANP32DO95626 131 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 PMLP29590 882 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 FMO4P31512 558 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 LSM12Q3MHD2 195 aaKnown RBP15.09■□□□□ 0.01
GPC3-202ENST00000394299 AGAP9Q5VTM2 703 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 ICE2Q659A1 982 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 ISCA2Q86U28 154 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 BBS7Q8IWZ6 715 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 SLC22A17Q8WUG5 538 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 C11orf49Q9H6J7 331 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 STOML2Q9UJZ1 356 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 FAM50BQ9Y247 325 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 OR51B4Q9Y5P0 310 aa15.09■□□□□ 0.01
GPC3-202ENST00000394299 ANKRD66B4E2M5 251 aa15.08■□□□□ 0
GPC3-202ENST00000394299 HDAC3O15379 428 aa15.08■□□□□ 0
GPC3-202ENST00000394299 WISP3O95389 354 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms