RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 NELFEP18615 380 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CCNCP24863 283 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ADRA1BP35368 520 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 INCA1Q0VD86 236 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 C1DQ13901 141 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DCLRE1AQ6PJP8 1040 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SPATA2LQ8IUW3 424 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 STK40Q8N2I9 435 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MPP5Q8N3R9 675 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PQLC3Q8N755 202 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MFSD2AQ8NA29 543 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 BPIFB6Q8NFQ5 453 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SKA2Q8WVK7 121 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 NXNL1Q96CM4 212 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SMARCD1Q96GM5 515 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MAGEB10Q96LZ2 347 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 BBS2Q9BXC9 721 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MRM3Q9HC36 420 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 VTA1Q9NP79 307 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 OR12D3Q9UGF7 316 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TCAF1Q9Y4C2 921 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DOT1LQ8TEK3 1739 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PRSS51A0A1B0GVH4 220 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF99A8MXY4 864 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 E7ENX8 843 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MFN2O95140 757 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 RASAL1O95294 804 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 RPLP2P05387 115 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HIST1H2AGP0C0S8 130 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ALOX12P18054 663 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HIST1H2ADP20671 130 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PTPN3P26045 913 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GABARAPL2P60520 117 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 LIPEQ05469 1076 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GALNT1Q10472 559 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GRIK2Q13002 908 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MAPK11Q15759 364 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 BRMS1LQ5PSV4 323 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TUBA3EQ6PEY2 450 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 BBS7Q8IWZ6 715 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CANT1Q8WVQ1 401 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 IPCEF1Q8WWN9 437 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HDAC2Q92769 488 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HIST1H2AHQ96KK5 128 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HIST1H2AJQ99878 128 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 H2AFJQ9BTM1 129 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TDRD1Q9BXT4 1180 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MROH8Q9H579 483 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GLOD4Q9HC38 313 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SARS2Q9NP81 518 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TMEM45AQ9NWC5 275 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DNAJB9Q9UBS3 223 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ZNHIT2Q9UHR6 403 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 RIMS3Q9UJD0 308 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 NUDT5Q9UKK9 219 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 NOD1Q9Y239 953 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PEX16Q9Y5Y5 336 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TAF4O00268 1085 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 COQ9O75208 318 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CHRNGP07510 517 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 FAM163BP0C2L3 166 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ITGA1P56199 1179 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF252P-AS1Q0IIN9 211 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CEACAM7Q14002 265 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PAFAH1B3Q15102 231 aaKnown RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TYSND1Q2T9J0 566 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GLYATQ6IB77 296 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PTAR1Q7Z6K3 402 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SIAH1Q8IUQ4 282 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TOP6BLQ8N6T0 577 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PSMA8Q8TAA3 256 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DNAJB14Q8TBM8 379 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 CHID1Q9BWS9 393 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DUSP16Q9BY84 665 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF221Q9UK13 617 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PKP3Q9Y446 797 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GMPPBQ9Y5P6 360 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 A0A1B0GVG6 124 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 LOC110117498-PIK3R3F6TDL0 507 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF197O14709 1029 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RNASEH2AO75792 299 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 IMPDH1P20839 514 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RAB25P57735 213 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 MYBPC1Q00872 1141 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FCHO2Q0JRZ9 810 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 LCP2Q13094 533 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PPM1LQ5SGD2 360 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CERCAMQ5T4B2 595 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 NCBP2-AS2Q69YL0 99 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms