RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ID4P47928 161 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 CDK18Q07002 472 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 SLC14A1Q13336 389 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 ACOX1Q15067 660 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 PCSK7Q16549 785 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 ZNF423Q2M1K9 1284 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 KYAT3Q6YP21 454 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 KDELC2Q7Z4H8 507 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 PTAR1Q7Z6K3 402 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 TP53I13Q8NBR0 393 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 OR13H1Q8NG92 308 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 MAIP1Q8WWC4 291 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 RMDN1Q96DB5 314 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 MLPHQ9BV36 600 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 ERVMER34-1Q9H9K5 563 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 USP29Q9HBJ7 922 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 KCTD5Q9NXV2 234 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 DLL3Q9NYJ7 618 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 UBP1Q9NZI7 540 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 RSPH14Q9UHP6 348 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 LAMA1P25391 3075 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 LRRK1Q38SD2 2015 aa19.05■□□□□ 0.64
PDLIM7-204ENST00000393546 NPIPB15A6NHN6 443 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 PSMD11O00231 422 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 TOR1BO14657 336 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 CEP104O60308 925 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 PMPCBO75439 489 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 RECQL5O94762 991 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 ZNF883P0CG24 379 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 TNNT3P45378 269 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 PUM1Q14671 1186 aaKnown RBP eCLIP19.04■□□□□ 0.643e-7■□□□□ 10.6
PDLIM7-204ENST00000393546 PTPRRQ15256 657 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 CNGA3Q16281 694 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 QPCTQ16769 361 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 WSCD2Q2TBF2 565 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 ANKRD20A2Q5SQ80 823 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 ANKRD20A1Q5TYW2 823 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 ANKRD20A3Q5VUR7 823 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 DENND2CQ68D51 928 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 CRTC1Q6UUV9 634 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 SPATS2Q86XZ4 545 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 CBARPQ8N350 705 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 OXR1Q8N573 874 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 SLC35B2Q8TB61 432 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 ELF4Q99607 663 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 IL21RQ9HBE5 538 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 MBNL1Q9NR56 388 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 TM7SF3Q9NS93 570 aa19.04■□□□□ 0.64
PDLIM7-204ENST00000393546 C5orf60A6NFR6 353 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 CAPN8A6NHC0 703 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 ENC1O14682 589 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 ZNF30P17039 623 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 LHCGRP22888 699 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 CXCR5P32302 372 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 YPEL5P62699 121 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 PRPSAP1Q14558 356 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 SUZ12Q15022 739 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 IRF4Q15306 451 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 PRAMEF14Q5SWL7 426 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 TSPAN33Q86UF1 283 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 SLC35F6Q8N357 371 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 PBKQ96KB5 322 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 COQ10AQ96MF6 247 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 SPATA13Q96N96 652 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 TRIB3Q96RU7 358 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 GBA3Q9H227 469 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 PYCARDQ9ULZ3 195 aa19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 FNDC3AQ9Y2H6 1198 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-204ENST00000393546 A0A1B0GTQ1 180 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 GOLGA8CPA6NN73 597 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 F5H423 210 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 TM4SF5O14894 197 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 ANXA9O76027 345 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 NDST3O95803 873 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 EPOP01588 193 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 FGGP02679 453 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 STIP1P31948 543 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 IGFALSP35858 605 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 ARRB1P49407 418 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 GEMP55040 296 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 WNT3AP56704 352 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 PFN3P60673 137 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 MPP3Q13368 585 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 GALNT3Q14435 633 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 LRRC66Q68CR7 880 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 KDELC1Q6UW63 502 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 HSD11B1LQ7Z5J1 315 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 FAM71DQ8N9W8 422 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 CCDC110Q8TBZ0 833 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 C1orf54Q8WWF1 131 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 ATG4AQ8WYN0 398 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 PPP1R2P1Q96PQ5 205 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 SMIM14Q96QK8 99 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 LYSMD1Q96S90 227 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 PCDHGB2Q9Y5G2 931 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 ASCC3Q8N3C0 2202 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 CABIN1Q9Y6J0 2220 aa19.02■□□□□ 0.64
PDLIM7-204ENST00000393546 TMEM131Q92545 1883 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 LOC285095A0A1B0GVY8 99 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 YKT6O15498 198 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms