RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 SMIM11AP58511 58 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 FBXL19Q6PCT2 694 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 XYLT1Q86Y38 959 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 ZNF557Q8N988 423 aaPredicted RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 HSD3B7Q9H2F3 369 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 ZNF180Q9UJW8 692 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 ZNF232Q9UNY5 417 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 MGRN1O60291 552 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 IPO13O94829 963 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 EPORP19235 508 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CXCR2P25025 360 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 IL12AP29459 219 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 STAT5AP42229 794 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 PFKPQ01813 784 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 KLRC2P26717 231 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CYP4F2P78329 520 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 SLC4A11Q8NBS3 891 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 CRISPLD1Q9H336 500 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 DCCP43146 1447 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 MROH1Q8NDA8 1641 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 SLC26A3P40879 764 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 SPIDRQ14159 915 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 FLCNQ8NFG4 579 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 ITCHQ96J02 903 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 C8orf4Q9NR00 106 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
LCA5-202ENST00000392959 CMTM6Q9NX76 183 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 POLR2EP19388 210 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 RPL9P32969 192 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 PTGIRP43119 386 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 RALGDSQ12967 914 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 ANKRD22Q5VYY1 191 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 FAM180AQ6UWF9 173 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
LCA5-202ENST00000392959 TOP6BLQ8N6T0 577 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 SOCS4Q8WXH5 440 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 LPGAT1Q92604 370 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
LCA5-202ENST00000392959 HAT1O14929 419 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 CCNE2O96020 404 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 HOXB6P17509 224 aaKnown RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PPM1JQ5JR12 505 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 CXCL17Q6UXB2 119 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 UROC1Q96N76 676 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 LENG8Q96PV6 779 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 KCNE2Q9Y6J6 123 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MST1RQ04912 1400 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 A0A088AWK7 358 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 CILPO75339 1184 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MTA2O94776 668 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 ZNF10P21506 573 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 GALNT3Q14435 633 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 XKR6Q5GH73 641 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ATG14Q6ZNE5 492 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 KRT74Q7RTS7 529 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 GPR156Q8NFN8 814 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 OR2T34Q8NGX1 318 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 OR2T3Q8NH03 318 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ZFP28Q8NHY6 868 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms