RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 UGT2B11O75310 529 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 BCAS2O75934 225 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-204ENST00000380393 ENO3P13929 434 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-204ENST00000380393 GTF2E2P29084 291 aaKnown RBP9.4□□□□□ -0.9
PTPRA-204ENST00000380393 ALDH4A1P30038 563 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 MERTKQ12866 999 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 FAPQ12884 760 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 KRR1Q13601 381 aaKnown RBP9.4□□□□□ -0.9
PTPRA-204ENST00000380393 CEACAM7Q14002 265 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 FAM160B1Q5W0V3 765 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF773Q6PK81 442 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 CHSY3Q70JA7 882 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 GDPD3Q7L5L3 318 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SLC30A5Q8TAD4 765 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TAS1R2Q8TE23 839 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SERAC1Q96JX3 654 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 CYP4F12Q9HCS2 524 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TMPRSS11EQ9UL52 423 aa9.4□□□□□ -0.9
PTPRA-204ENST00000380393 TP53BP1Q12888 1972 aaPredicted RBP9.4□□□□□ -0.91
PTPRA-204ENST00000380393 FSCN2O14926 492 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 BANF1O75531 89 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FTLP02792 175 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TRIM49P0CI25 452 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TRIM49CP0CI26 452 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ALOX12P18054 663 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CD53P19397 219 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CYP2J2P51589 502 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 LSM3P62310 102 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 SNRPD2P62316 118 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ALDH6A1Q02252 535 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 GRM4Q14833 912 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 LTB4RQ15722 352 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 GPR68Q15743 365 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 NXNL2Q5VZ03 156 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CES4AQ5XG92 561 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RETSATQ6NUM9 610 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 GADL1Q6ZQY3 521 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 SLC16A12Q6ZSM3 486 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 METTL4Q8N3J2 472 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FAM156AQ8NDB6 213 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FAM83FQ8NEG4 500 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 OR52H1Q8NGJ2 320 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PNPT1Q8TCS8 783 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MZB1Q8WU39 189 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ST8SIA4Q92187 359 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FYTTD1Q96QD9 318 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MNTQ99583 582 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF416Q9BWM5 594 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 C20orf27Q9GZN8 174 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 C8orf33Q9H7E9 229 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 SNX15Q9NRS6 342 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 IPO11Q9UI26 975 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 LACTBL1A8MY62 500 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CYB561D2O14569 222 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CYP11B1P15538 503 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MSH3P20585 1137 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 HLA-FP30511 346 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ARFIP1P53367 373 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DEFA1P59665 94 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DEFA3P59666 94 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 BNC1Q01954 994 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FPGSQ05932 587 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 INCA1Q0VD86 236 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PIGGQ5H8A4 983 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RTP2Q5QGT7 225 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 LIPIQ6XZB0 460 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 USP50Q70EL3 339 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 BTN2A1Q7KYR7 527 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DPP9Q86TI2 863 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 KIF18BQ86Y91 864 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 KYQ8NBH2 561 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 OR4M1Q8NGD0 313 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 WDR48Q8TAF3 677 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RADILQ96JH8 1075 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 BEX2Q9BXY8 128 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DSN1Q9H410 356 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RANBP3Q9H6Z4 567 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PCDHB16Q9NRJ7 776 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TSR3Q9UJK0 312 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MAGED2Q9UNF1 606 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 YDJCA8MPS7 323 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TOM1L1O75674 476 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 SRCP12931 536 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 IL1R1P14778 569 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 AKR1B1P15121 316 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms