RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 APLFQ8IW19 511 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NDUFAF2Q8N183 169 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 UMODL1-AS1Q8N2C9 162 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TFB1MQ8WVM0 346 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 USP13Q92995 863 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TCEAL4Q96EI5 215 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 P2RY11Q96G91 374 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 GUCD1Q96NT3 240 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CATSPERBQ9H7T0 1116 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CASS4Q9NQ75 786 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TDP1Q9NUW8 608 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 OR12D3Q9UGF7 316 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 EGFL7Q9UHF1 273 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CD207Q9UJ71 328 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 AGO1Q9UL18 857 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TARM1B6A8C7 271 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 E9PAM4 449 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 H3BNX3 289 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 SLC9A3R1O14745 358 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 SKAP2O75563 359 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TBX18O95935 607 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TACR2P21452 398 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 GMPRP36959 345 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ARL4AP40617 200 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NSUN2Q08J23 767 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FCHO2Q0JRZ9 810 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 IFRD2Q12894 506 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NAA25Q14CX7 972 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 LEXMQ3ZCV2 418 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 HABP4Q5JVS0 413 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MROH9Q5TGP6 573 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CES5AQ6NT32 575 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NAPRTQ6XQN6 538 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ZCCHC23Q6ZST2 131 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 SMARCD2Q92925 531 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 SLC22A12Q96S37 553 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MLPHQ9BV36 600 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 C2orf49Q9BVC5 232 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TRPV5Q9NQA5 729 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 STOML1Q9UBI4 398 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 LSM7Q9UK45 103 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MRPS23Q9Y3D9 190 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CPQQ9Y646 472 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FAM72CH0Y354 149 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 H0Y3Z8 333 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TK2O00142 265 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TNFRSF10AO00220 468 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 RNF103O00237 685 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 PPP1R12AO14974 1030 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 GLRA3O75311 464 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 KLKB1P03952 638 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 GLDCP23378 1020 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CDH4P55283 916 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CRADDP78560 199 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 MRPS35P82673 323 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 TRMT5Q32P41 509 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 RARS2Q5T160 578 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FAM72AQ5TYM5 149 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FAM72DQ6L9T8 149 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 FAM72BQ86X60 149 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NPWQ8N729 165 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ARL14EPQ8N8R7 260 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 RTL3Q8N8U3 475 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
CDKL5-202ENST00000379996 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 RBBP8Q99708 897 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 ZYG11BQ9C0D3 744 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 COPG2Q9UBF2 871 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 PPM1HQ9ULR3 514 aa7.78□□□□□ -1.16
CDKL5-202ENST00000379996 EEF2KO00418 725 aaKnown RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 CASQ2O14958 399 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 SIN3BO75182 1162 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 LRIG2O94898 1065 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 PENKP01210 267 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 ANPEPP15144 967 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 MGAT1P26572 445 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 CORO1AP31146 461 aaKnown RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 OXCT1P55809 520 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 TMPRSS15P98073 1019 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 CREB5Q02930 508 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 MSLNQ13421 630 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 N4BP2L1Q5TBK1 243 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 EPGNQ6UW88 154 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 KIAA0907Q7Z7F0 614 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 SETD3Q86TU7 594 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 NUDCD3Q8IVD9 361 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 C10orf107Q8IVU9 208 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 SCUBE1Q8IWY4 988 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 PLD6Q8N2A8 252 aaKnown RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 CCDC33Q8N5R6 958 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 ACVR1CQ8NER5 493 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 ITFG1Q8TB96 612 aa7.77□□□□□ -1.17
CDKL5-202ENST00000379996 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-202ENST00000379996 ACTRT2Q8TDY3 377 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms