RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TRIP4Q15650 581 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 PCID2Q5JVF3 399 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 NEPROQ6NW34 567 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 LINC00523Q86TU6 105 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FBXO27Q8NI29 283 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SH3RF2Q8TEC5 729 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 MCUR1Q96AQ8 359 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 RPL10LQ96L21 214 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 MRPL9Q9BYD2 267 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 EIF2B3Q9NR50 452 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FETUBQ9UGM5 382 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SOX13Q9UN79 622 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FAM50BQ9Y247 325 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TMED5Q9Y3A6 229 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TRIOO75962 3097 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 PFDN1O60925 122 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 GLRA3O75311 464 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 URODP06132 367 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DLDP09622 509 aaKnown RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 HNRNPLP14866 589 aaKnown RBP eCLIP10.85□□□□□ -0.672e-9■■■□□ 17.6
NEDD9-201ENST00000379433 RHOQP17081 205 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 PMLP29590 882 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 ARRB2P32121 409 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SLC11A2P49281 568 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 OXCT1P55809 520 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 PCLAFQ15004 111 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 GEN1Q17RS7 908 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 GRAMD1BQ3KR37 738 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 LRRC73Q5JTD7 316 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 ATXN7L2Q5T6C5 722 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 RNF219Q5W0B1 726 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DENND5AQ6IQ26 1287 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SPRED2Q7Z698 418 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 OR8H2Q8N162 312 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 ARHGAP18Q8N392 663 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 LZTR1Q8N653 840 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 LPCAT1Q8NF37 534 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 CLPTM1LQ96KA5 538 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DNAJC1Q96KC8 554 aaKnown RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 PSKH2Q96QS6 385 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 TSC22D3Q99576 134 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DRC3Q9H069 523 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 WDR55Q9H6Y2 383 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 NMRAL1Q9HBL8 299 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 EDARQ9UNE0 448 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SYNDIG1LA6NDD5 238 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 K7ERQ8 282 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 UNC5CO95185 931 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 C1RP00736 705 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 RHOCP08134 193 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 PDHA1P08559 390 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 TSHRP16473 764 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SYN1P17600 705 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 CES1P23141 567 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 NPY2RP49146 381 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SERPINB8P50452 374 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SERPINH1P50454 418 aaKnown RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 LIMK2P53671 638 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 TAS2R39P59534 338 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SP140Q13342 867 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SNCBQ16143 134 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 FSCBQ5H9T9 825 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SIRPB2Q5JXA9 342 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 GRTP1Q5TC63 336 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DNAJB7Q7Z6W7 309 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 GATAD2AQ86YP4 633 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 ZBTB8BQ8NAP8 495 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 DDI1Q8WTU0 396 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 CCDC124Q96CT7 223 aaKnown RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 KCNK13Q9HB14 408 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 NOD2Q9HC29 1040 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 POLMQ9NP87 494 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 TCF7L2Q9NQB0 619 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.85□□□□□ -0.673e-10■■□□□ 12.6
NEDD9-201ENST00000379433 RHBDL2Q9NX52 303 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 MARCH4Q9P2E8 410 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-201ENST00000379433 COPG2Q9UBF2 871 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 XPR1Q9UBH6 696 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 VPS28Q9UK41 221 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 FBXO5Q9UKT4 447 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 CHD9Q3L8U1 2897 aa10.85□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF840PA6NDX5 716 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NCF1BA6NI72 391 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NCF1CA8MVU1 366 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM233B4DJY2 109 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 GYG2O15488 501 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ENTPD5O75356 428 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 ALDH1A2O94788 518 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MTHFD1P11586 935 aaKnown RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 MYL4P12829 197 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 NCF1P14598 390 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-201ENST00000379433 CTPS1P17812 591 aa10.84□□□□□ -0.67
NEDD9-201ENST00000379433 HDCP19113 662 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms