RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 KDM7AQ6ZMT4 941 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 Q6ZSR6 202 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 USP45Q70EL2 814 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CBARPQ8N350 705 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 LPCAT1Q8NF37 534 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 FAM174AQ8TBP5 190 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 C1QTNF7Q9BXJ2 289 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 USP29Q9HBJ7 922 aa21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 RPL26L1Q9UNX3 145 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PI4KAP42356 2102 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 A0A0U1RQS6 177 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 DCDC2BA2VCK2 349 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 GOLGA8CPA6NN73 597 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 A6NNZ2 444 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 KCNN4O15554 427 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 RECQL5O94762 991 aaPredicted RBP21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 LHCGRP22888 699 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 IGFALSP35858 605 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 LRRC14Q15048 493 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ACOX1Q15067 660 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 IRF4Q15306 451 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 QPCTQ16769 361 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 KDELC2Q7Z4H8 507 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PTAR1Q7Z6K3 402 aaPredicted RBP21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 TSPAN33Q86UF1 283 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 SLC35B2Q8TB61 432 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 COQ10AQ96MF6 247 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 FCRL5Q96RD9 977 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 TRIB3Q96RU7 358 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ELF4Q99607 663 aaPredicted RBP21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 FERMT1Q9BQL6 677 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 UBP1Q9NZI7 540 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PLXNA2O75051 1894 aa21.04■□□□□ 0.96
MAP1LC3A-202ENST00000374837 F5H423 210 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PMPCBO75439 489 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ZNF883P0CG24 379 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CD59P13987 128 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 RABIFP47224 123 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PFN3P60673 137 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CDK18Q07002 472 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CCDC173Q0VFZ6 552 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 SLC14A1Q13336 389 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PCSK7Q16549 785 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CRTC1Q6UUV9 634 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 HSD11B1LQ7Z5J1 315 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 SLC22A18ASQ8N1D0 253 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ERVMER34-1Q9H9K5 563 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 GPR27Q9NS67 375 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 TM7SF3Q9NS93 570 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 FAM153AQ9UHL3 310 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 PYCARDQ9ULZ3 195 aa21.03■□□□□ 0.96
MAP1LC3A-202ENST00000374837 A0A1B0GTQ1 180 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ANKRD66B4E2M5 251 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 DFNA5O60443 496 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ARHGEF7Q14155 803 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 GALNT3Q14435 633 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 SHBQ15464 509 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ZNF569Q5MCW4 686 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ANKRD20A2Q5SQ80 823 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ANKRD20A1Q5TYW2 823 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ANKRD20A3Q5VUR7 823 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 DENND2CQ68D51 928 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 KDELC1Q6UW63 502 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 DCP2Q8IU60 420 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 OXNAD1Q96HP4 312 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 MLPHQ9BV36 600 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 ADGRE3Q9BY15 652 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 RSPH14Q9UHP6 348 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 DNPEPQ9ULA0 475 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 JRKLQ9Y4A0 524 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 CACNA1GO43497 2377 aa21.02■□□□□ 0.96
MAP1LC3A-202ENST00000374837 TRPM6Q9BX84 2022 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CAPN8A6NHC0 703 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 USP27XA6NNY8 438 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PSMD11O00231 422 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ENC1O14682 589 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 STK10O94804 968 aaKnown RBP21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 WNT3AP56704 352 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 IL9RQ01113 521 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PTSQ03393 145 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ST3GAL2Q16842 350 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 TPRG1LQ5T0D9 272 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LRRC66Q68CR7 880 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ITPRIPL1Q6GPH6 555 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SLC35F6Q8N357 371 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CCDC110Q8TBZ0 833 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ATG4AQ8WYN0 398 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 IFT43Q96FT9 208 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LYSMD1Q96S90 227 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GBA3Q9H227 469 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PCDHGB2Q9Y5G2 931 aa21.01■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CACNA1EQ15878 2313 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 DOCK9Q9BZ29 2069 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CEP104O60308 925 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ZNF189O75820 626 aaPredicted RBP21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 NDST3O95803 873 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PCCBP05166 539 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CXCR5P32302 372 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ETV3P41162 512 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 RXRGP48443 463 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms