RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 AGTP01019 485 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 IGLV2-14P01704 120 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 PRKCBP05771 671 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CALB1P05937 261 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MMP8P22894 467 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CDH5P33151 784 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 TCF7P36402 384 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 MAGEA9P43362 315 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ACOT2P49753 483 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 SLC26A2P50443 739 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MAGOHP61326 146 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 YWHAEP62258 255 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 KRT17Q04695 432 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 IFFO1Q0D2I5 559 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 DYRK1AQ13627 763 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MXD4Q14582 209 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 HLXQ14774 488 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 PPP1R7Q15435 360 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CCNG2Q16589 344 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 LRRC38Q5VT99 294 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 LMBRD2Q68DH5 695 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 SPOPLQ6IQ16 392 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 TMEM270Q6UE05 265 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 TMPRSS9Q7Z410 1059 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 YTHDF3Q7Z739 585 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 PNMA8AQ86V59 439 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 PDSS2Q86YH6 399 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CCDC105Q8IYK2 499 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CFAP52Q8N1V2 620 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 BBOF1Q8ND07 529 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 TMIEQ8NEW7 156 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 OR5B17Q8NGF7 314 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 EXD1Q8NHP7 514 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 MYCBPAPQ8TBZ2 947 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ZNF473Q8WTR7 871 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 PRPF31Q8WWY3 499 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 SNF8Q96H20 258 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ZBTB45Q96K62 511 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 ACO2Q99798 780 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 C11orf70Q9BRQ4 267 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 SPATA5L1Q9BVQ7 753 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 RHOBTB2Q9BYZ6 727 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ROPN1BQ9BZX4 212 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 DCLK3Q9C098 648 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ZNF518BQ9C0D4 1074 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 STMN4Q9H169 189 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 AZI2Q9H6S1 392 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ROPN1Q9HAT0 212 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 CHST12Q9NRB3 414 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 PARVAQ9NVD7 372 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 ADAM22Q9P0K1 906 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CHORDC1Q9UHD1 332 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 IP6K2Q9UHH9 426 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 CPSF3Q9UKF6 684 aaKnown RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 PNMA8BQ9ULN7 279 aaPredicted RBP4.97□□□□□ -1.61
USP48-202ENST00000374730 FAM169AQ9Y6X4 670 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 SCN4AP35499 1836 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 ZNF236Q9UL36 1845 aa4.97□□□□□ -1.61
USP48-202ENST00000374730 TRIP11Q15643 1979 aa4.96□□□□□ -1.61
USP48-202ENST00000374730 TCRBV5S1A1TA0A578 114 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CCDC189A1A4V9 331 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 GMNCA6NCL1 334 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 ACKR2O00590 384 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 NDC80O14777 642 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TP73O15350 636 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 RGS16O15492 202 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 ASAP2O43150 1006 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 THAP12O43422 761 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TCEA3O75764 348 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 C1QL1O75973 258 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 IL18RAPO95256 599 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 ARIH2O95376 493 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CALCAP01258 141 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 HOXC6P09630 235 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TMEM191BP0C7N4 346 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 IVDP26440 423 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 HPDP32754 393 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 CETN2P41208 172 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 MMP13P45452 471 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 HTR3AP46098 478 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 KCNJ1P48048 391 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 GSCP56915 257 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 TAS2R40P59535 323 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 IRX3P78415 501 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 FPGSQ05932 587 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 LAMTOR4Q0VGL1 99 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 PPIL2Q13356 520 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 DRP2Q13474 957 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 MAMLD1Q13495 774 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TFDP1Q14186 410 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 SLC29A2Q14542 456 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 PLCB4Q15147 1175 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 MAPK6Q16659 721 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 SGSM1Q2NKQ1 1148 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TMEM95Q3KNT9 176 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 UAP1L1Q3KQV9 507 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms