RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 LRRC39Q96DD0 335 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 KLHL32Q96NJ5 620 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 IL22Q9GZX6 179 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 FBRSQ9HAH7 460 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 SYBUQ9NX95 663 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 SAMD15Q9P1V8 674 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 CHMP2BQ9UQN3 213 aa17.6■□□□□ 0.41
PFDN6-201ENST00000374606 CEP295Q9C0D2 2601 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 SDR42E2A6NKP2 422 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 KPNA3O00505 521 aaPredicted RBP17.59■□□□□ 0.41
PFDN6-201ENST00000374606 H2AFXP16104 143 aaPredicted RBP17.59■□□□□ 0.41
PFDN6-201ENST00000374606 TPH1P17752 444 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 PSMD8P48556 350 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 CBLBQ13191 982 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 FASTKD3Q14CZ7 662 aaKnown RBP17.59■□□□□ 0.41
PFDN6-201ENST00000374606 CCDC38Q502W7 563 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 ZNF805Q5CZA5 627 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 CERCAMQ5T4B2 595 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 BRAT1Q6PJG6 821 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 ANKMY2Q8IV38 441 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 NDUFAF2Q8N183 169 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 SYNPOQ8N3V7 929 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 TMIEQ8NEW7 156 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 PIP4K2CQ8TBX8 421 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 ERLEC1Q96DZ1 483 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 PPP1R16AQ96I34 528 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 LOXL4Q96JB6 756 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 MAD1L1Q9Y6D9 718 aa17.59■□□□□ 0.41
PFDN6-201ENST00000374606 TSPAN11A1L157 253 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 RNASEH1O60930 286 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 ADAM23O75077 832 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 IL1BP01584 269 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 ELK3P41970 407 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 MAGEA4P43358 317 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 CRADDP78560 199 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 SEPT6Q14141 434 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 POU6F1Q14863 301 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 SF3A2Q15428 464 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 QPCTQ16769 361 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 FAM46CQ5VWP2 391 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 DENND2CQ68D51 928 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 FBXO38Q6PIJ6 1188 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 ZSWIM9Q86XI8 627 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 RELL1Q8IUW5 271 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 MMAAQ8IVH4 418 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 AGGF1Q8N302 714 aaeCLIP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 MPP5Q8N3R9 675 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 FBXO36Q8NEA4 188 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 PPHLN1Q8NEY8 458 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 OR2T3Q8NH03 318 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 BLOC1S5Q8TDH9 187 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 PYROXD1Q8WU10 500 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 HNRNPLLQ8WVV9 542 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 PIH1D2Q8WWB5 315 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 STAMBPL1Q96FJ0 436 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 SIGLEC10Q96LC7 697 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 C9orf72Q96LT7 481 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 FAM129BQ96TA1 746 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 RSPH9Q9H1X1 276 aaPredicted RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 ARRDC1-AS1Q9H2J1 176 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 CDC42EP4Q9H3Q1 356 aaKnown RBP17.58■□□□□ 0.4
PFDN6-201ENST00000374606 DYRK4Q9NR20 520 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 DKK3Q9UBP4 350 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 PPM1HQ9ULR3 514 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 MMP17Q9ULZ9 603 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 PHTF1Q9UMS5 762 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 TEX264Q9Y6I9 313 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 BAHCC1Q9P281 2608 aa17.58■□□□□ 0.4
PFDN6-201ENST00000374606 ATRXP46100 2492 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 A0A0J9YYE9 177 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ANKRD66B4E2M5 251 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 TM4SF5O14894 197 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 AXIN1O15169 862 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 EPN2O95208 641 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 TRBC1P01850 177 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ZNF806P0C7X5 589 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 XPAP23025 273 aaPredicted RBP17.57■□□□□ 0.4
PFDN6-201ENST00000374606 NFKBIAP25963 317 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ITGB7P26010 798 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 PMS2P54278 862 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 POLR2LP62875 67 aaKnown RBP17.57■□□□□ 0.4
PFDN6-201ENST00000374606 POM121L1PQ3SYA9 428 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ZNF776Q68DI1 518 aaPredicted RBP17.57■□□□□ 0.4
PFDN6-201ENST00000374606 KIAA1211LQ6NV74 962 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 USP45Q70EL2 814 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 HCAR2Q8TDS4 363 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 TTC25Q96NG3 672 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 WDR83Q9BRX9 315 aaKnown RBP17.57■□□□□ 0.4
PFDN6-201ENST00000374606 NAT9Q9BTE0 207 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 TXLNGYQ9BZA5 131 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ARFGAP3Q9NP61 516 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 C2orf42Q9NWW7 574 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 HACD3Q9P035 362 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ZC3H7BQ9UGR2 993 aaKnown RBP17.57■□□□□ 0.4
PFDN6-201ENST00000374606 SARDHQ9UL12 918 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 TCAF1Q9Y4C2 921 aa17.57■□□□□ 0.4
PFDN6-201ENST00000374606 ATG2BQ96BY7 2078 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms