RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 GZMAP12544 262 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 LHCGRP22888 699 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 HTR1BP28222 390 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 TRIM23P36406 574 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 HCAR3P49019 387 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 BLKP51451 505 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 TMPRSS3P57727 454 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 KIAA1024LP59773 190 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 MAXP61244 160 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 TRAF2Q12933 501 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 LY6DQ14210 128 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 IHHQ14623 411 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 ACOX1Q15067 660 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 TGIF1Q15583 401 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 CNGA3Q16281 694 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 PNCKQ6P2M8 343 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 OGFOD3Q6PK18 319 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 POLNQ7Z5Q5 900 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 CLEC14AQ86T13 490 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 GKN2Q86XP6 184 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
RPF1-201ENST00000370654 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 FNIP1Q8TF40 1166 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 LRRN3Q9H3W5 708 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
RPF1-201ENST00000370654 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 EPB41L5Q9HCM4 733 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 CYP4F12Q9HCS2 524 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
RPF1-201ENST00000370654 KALRNO60229 2985 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 B4DGG1 531 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 HTRA2O43464 458 aaPredicted RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 MAFKO60675 156 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 RARAP10276 462 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 UGT1A5P35504 534 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 CFHR1Q03591 330 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 VAC14Q08AM6 782 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 NR1I3Q14994 352 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 IQCB1Q15051 598 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 TMCO4Q5TGY1 634 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 BROXQ5VW32 411 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 DENND2CQ68D51 928 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 HSD11B1LQ7Z5J1 315 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 TAF8Q7Z7C8 310 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 TSPAN33Q86UF1 283 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 NRROSQ86YC3 692 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 SCG3Q8WXD2 468 aaKnown RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 HSPH1Q92598 858 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 GRAMD1AQ96CP6 724 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 LIN37Q96GY3 246 aaPredicted RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 GFM1Q96RP9 751 aaKnown RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 ISCUQ9H1K1 167 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 SPATS2LQ9NUQ6 558 aaKnown RBP13.19□□□□□ -0.3
RPF1-201ENST00000370654 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
RPF1-201ENST00000370654 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 UNC13CQ8NB66 2214 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 ERVH48-1M5A8F1 160 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 CACNB4O00305 520 aaPredicted RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 PLD2O14939 933 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 CD48P09326 243 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 ITIH1P19827 911 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 IL4RP24394 825 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 SLC5A2P31639 672 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 PCK1P35558 622 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 ETV5P41161 510 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 ETV3P41162 512 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 POLD2P49005 469 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 MAZP56270 477 aaKnown RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 AP1S1P61966 158 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPF1-201ENST00000370654 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 RAB11FIP2Q7L804 512 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 FBXO39Q8N4B4 442 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 LSM14AQ8ND56 463 aaKnown RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 PDCD6IPQ8WUM4 868 aaKnown RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 SNRNP27Q8WVK2 155 aaKnown RBP13.18□□□□□ -0.3
RPF1-201ENST00000370654 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 PCDH18Q9HCL0 1135 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms