RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TACR2P21452 398 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 HTR7P34969 479 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 KCNJ2P63252 427 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 TRIM71Q2Q1W2 868 aaKnown RBP19.7■□□□□ 0.74
LMO4-202ENST00000370544 RASAL3Q86YV0 1011 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 POLR1DQ9Y2S0 133 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 KCNE2Q9Y6J6 123 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 IFNA16P05015 189 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 HNF4AP41235 474 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 PTPN9P43378 593 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 COPZ1P61923 177 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CUZD1Q86UP6 607 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 PACS2Q86VP3 889 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 FBXW8Q8N3Y1 598 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 LENG1Q96BZ8 264 aaPredicted RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 HDHD2Q9H0R4 259 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 TSC22D4Q9Y3Q8 395 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 C1RP00736 705 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 PTP4A2Q12974 167 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 SLC44A4Q53GD3 710 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 ZDHHC20Q5W0Z9 365 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 GPR180Q86V85 440 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CCDC185Q8N715 623 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CPT1BQ92523 772 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 HNRNPABQ99729 332 aaKnown RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 ACBD6Q9BR61 282 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 SLC4A5Q9BY07 1137 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CYLDQ9NQC7 956 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 ARL5CA6NH57 179 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CRHR1P34998 444 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 HECTD2Q5U5R9 776 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 EIF3MQ7L2H7 374 aaKnown RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 NKD2Q969F2 451 aaPredicted RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 PLK2Q9NYY3 685 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 ASF1AQ9Y294 204 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 ZNF280AP59817 542 aaPredicted RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 CDC42P60953 191 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 BHLHB9Q6PI77 547 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CRTC3Q6UUV7 619 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 AGAP11Q8TF27 550 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 CSNK2BP67870 215 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 ARMC4Q5T2S8 1044 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 UBE2R2Q712K3 238 aaPredicted RBP19.69■□□□□ 0.74
LMO4-202ENST00000370544 HEXDCQ8WVB3 486 aa19.69■□□□□ 0.74
LMO4-202ENST00000370544 URADA6NGE7 173 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 COX10Q12887 443 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 USP4Q13107 963 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 NEK10Q6ZWH5 1172 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 RAVER1Q8IY67 606 aaKnown RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 LRRC57Q8N9N7 239 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 PTCD2Q8WV60 388 aaKnown RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 SPATA5L1Q9BVQ7 753 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 AFDNP55196 1824 aaKnown RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 CCNCP24863 283 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 CDH13P55290 713 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 OR4K2Q8NGD2 314 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 RERGQ96A58 199 aaPredicted RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 PCED1BQ96HM7 432 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 AASDHPPTQ9NRN7 309 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.68■□□□□ 0.74
LMO4-202ENST00000370544 POLR3HQ9Y535 204 aaPredicted RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 GLYATL1P3A0A0U1RQE8 302 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 OR6A2O95222 327 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 JAK1P23458 1154 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 RGS1Q08116 209 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 TRIM25Q14258 630 aaKnown RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 DGUOKQ16854 277 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 GPAT3Q53EU6 434 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 RSBN1Q5VWQ0 802 aaPredicted RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 TRIQKQ629K1 86 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 NLGN2Q8NFZ4 835 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 CD99L2Q8TCZ2 262 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 AKAP7Q9P0M2 348 aaPredicted RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 PLLPQ9Y342 182 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 TRAF6Q9Y4K3 522 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 RAI2Q9Y5P3 530 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 ISM1B1AKI9 464 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 FAM155BO75949 473 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 MED26O95402 600 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 IDH2P48735 452 aaKnown RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 TOP3AQ13472 1001 aaPredicted RBP19.68■□□□□ 0.74
LMO4-202ENST00000370544 DHDDSQ86SQ9 333 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 FAM20CQ8IXL6 584 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 PANX1Q96RD7 426 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 TRMOQ9BU70 441 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 ADI1Q9BV57 179 aa19.68■□□□□ 0.74
LMO4-202ENST00000370544 CCL16O15467 120 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 GSTM5P46439 218 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 NDUFV1P49821 464 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ENPEPQ07075 957 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 R3HCC1LQ7Z5L2 792 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 COMMD2Q86X83 199 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ZCCHC7Q8N3Z6 543 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 TIFAQ96CG3 184 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ITCHQ96J02 903 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 SMIM31A0A1B0GVY4 71 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 C5orf60A6NFR6 353 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 SYN3O14994 580 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 KRT36O76013 467 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms