RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NOL6Q9H6R4 1146 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 VPS45Q9NRW7 570 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MOCS1Q9NZB8 636 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PCYOX1Q9UHG3 505 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 H0YJX3 145 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TM7SF2O76062 418 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PSMC3P17980 439 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 RFX1P22670 979 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 MZF1P28698 734 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CTHP32929 405 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 GALCP54803 685 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CYTH1Q15438 398 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 NFE2Q16621 373 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 KYNUQ16719 465 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SFT2D3Q587I9 215 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ATAT1Q5SQI0 421 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CCBE1Q6UXH8 406 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 DHDDSQ86SQ9 333 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ADAMTSL2Q86TH1 951 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PLPP6Q8IY26 295 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CELF5Q8N6W0 485 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TRUB1Q8WWH5 349 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SMG7Q92540 1137 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SLCO2A1Q92959 643 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 MARVELD3Q96A59 401 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PLEKHA8Q96JA3 519 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PITPNM3Q9BZ71 974 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SHCBP1LQ9BZQ2 653 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SEPT10Q9P0V9 454 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 LIMD1Q9UGP4 676 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ERGIC3Q9Y282 383 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 LEFTY2O00292 366 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CLOCKO15516 846 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 MTA2O94776 668 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TGDSO95455 350 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CALCAP01258 141 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CSH1P0DML2 217 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CSH2P0DML3 217 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CD19P15391 556 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 IGFBP4P22692 258 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ACAT1P24752 427 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 NUDT1P36639 197 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 GNL1P36915 607 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 BNC1Q01954 994 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PPARDQ03181 441 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 IHHQ14623 411 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 MAPRE1Q15691 268 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 DDR2Q16832 855 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ALG1LQ6GMV1 187 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SCARA5Q6ZMJ2 495 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 RFPL4BQ6ZWI9 263 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 LRRC6Q86X45 466 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 XYLT1Q86Y38 959 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 LINC00469Q8N7U9 141 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 AP1M1Q9BXS5 423 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 S100A14Q9HCY8 104 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 DDX18Q9NVP1 670 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 RRN3Q9NYV6 651 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 AMFRQ9UKV5 643 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 FAF1Q9UNN5 650 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PCM1Q15154 2024 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 FAM86C2PA6NEL3 165 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 K7EPI3 171 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ATMINO43313 823 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CRYZL1O95825 349 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 FTLP02792 175 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TMEM191BP0C7N4 346 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 COL9A1P20849 921 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ENTPD1P49961 510 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 NOMO3P69849 1222 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 GALNT2Q10471 571 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CYP1B1Q16678 543 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 LSM12Q3MHD2 195 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TAF1BQ53T94 588 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 C2CD6Q53TS8 623 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 RNF111Q6ZNA4 994 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PHF13Q86YI8 300 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TDRPQ86YL5 185 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TERB1Q8NA31 727 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 EPS8L3Q8TE67 593 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 PPP4R1Q8TF05 950 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 CLEC4CQ8WTT0 213 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SLC20A1Q8WUM9 679 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 ARHGEF2Q92974 986 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 FUBP1Q96AE4 644 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 OTUB2Q96DC9 234 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TTC25Q96NG3 672 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 APOL6Q9BWW8 343 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 DLL3Q9NYJ7 618 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 TAS2R1Q9NYW7 299 aa6.92□□□□□ -1.3
CSDE1-204ENST00000369530 INTS6Q9UL03 887 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.92□□□□□ -1.3
CSDE1-204ENST00000369530 A0A1W2PRU2 124 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TSPAN11A1L157 253 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms