RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ACADSBP45954 432 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CXCR3P49682 368 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 PMS1P54277 932 aaKnown RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 ABHD18Q0P651 414 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 PDCLQ13371 301 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 SEPT6Q14141 434 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 STILQ15468 1287 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 TMEM52BQ4KMG9 183 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 TCERG1LQ5VWI1 586 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 GDPD4Q6W3E5 623 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 ZSWIM9Q86XI8 627 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 XYLT1Q86Y38 959 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CEP57L1Q8IYX8 460 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 OR4D9Q8NGE8 314 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CXorf40AQ8TE69 158 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 FOXD4L4Q8WXT5 416 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 ARHGEF2Q92974 986 aaKnown RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 ISG20Q96AZ6 181 aaKnown RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 UNKQ9C0B0 810 aaKnown RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 TKTL2Q9H0I9 626 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 AKAP7Q9P0M2 348 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 LUZP4Q9P127 313 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 PDP2Q9P2J9 529 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 CNTN6Q9UQ52 1028 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 TMEM184BQ9Y519 407 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 TNRC6AQ8NDV7 1962 aaKnown RBP8.53□□□□□ -1.04
HMGB1P39-201ENST00000366304 MKRN2OSH3BPM6 223 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 STX10O60499 249 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 STK17BO94768 372 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 ERBB2P04626 1255 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 AK4P27144 223 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 CSTF2P33240 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 PMS2P54278 862 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 MC2RQ01718 297 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 GNA12Q03113 381 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 PTK2Q05397 1052 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC20A2Q08357 652 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 SQSTM1Q13501 440 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRA2AQ13595 282 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 ERV3-1Q14264 604 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 INPP5JQ15735 1006 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 RAB6CQ53S08 254 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 RETSATQ6NUM9 610 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 OLFML1Q6UWY5 402 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZNF761Q86XN6 746 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 DRC7Q8IY82 874 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 NAGSQ8N159 534 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 PPM1KQ8N3J5 372 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 OR56A4Q8NGH8 313 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 KIAA1143Q96AT1 154 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 C19orf60Q96EN9 201 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 MED15Q96RN5 788 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 NPY6RQ99463 290 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRIM62Q9BVG3 475 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 C1QTNF7Q9BXJ2 289 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 MAGEB5Q9BZ81 275 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 KLC2Q9H0B6 622 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 RAB6CQ9H0N0 254 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 PCDH12Q9NPG4 1184 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 TAAR2Q9P1P5 351 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 PLEKHM1Q9Y4G2 1056 aa8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
HMGB1P39-201ENST00000366304 A0A1B0GVL5 298 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 RHPN2P1A8MT19 583 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 A8MU76 341 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 KRT86O43790 486 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 SRGAP2O75044 1071 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 RFPL1O75677 317 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 LETM1O95202 739 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 PIGNO95427 931 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 POP4O95707 220 aaKnown RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 GSRP00390 522 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 EPB41P11171 864 aaKnown RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 SNRPBP14678 240 aaKnown RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 PFKFB1P16118 471 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 HTR1BP28222 390 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 ME1P48163 572 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 FMO5P49326 533 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 LIG3P49916 1009 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 KIAA1024LP59773 190 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 CLPPQ16740 277 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 CPZQ66K79 652 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRNP1Q6NT89 227 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms