RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 OSER1Q9NX31 292 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 FIS1Q9Y3D6 152 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 MATN4O95460 622 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 HLA-DQB2P05538 268 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 PSMA4P25789 261 aaKnown RBP17.76■□□□□ 0.43
RTN4-204ENST00000357732 NDST2P52849 883 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 HERVK_113P63132 956 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 NRG1Q02297 640 aaPredicted RBP17.76■□□□□ 0.43
RTN4-204ENST00000357732 HECTD2Q5U5R9 776 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 CYP2R1Q6VVX0 501 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 ARHGAP36Q6ZRI8 547 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 FAM47BQ8NA70 645 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 CANT1Q8WVQ1 401 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 ERVK-6Q9BXR3 956 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 SLC25A51Q9H1U9 297 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 PLGRKTQ9HBL7 147 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 AGPAT4Q9NRZ5 378 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 ACTR3BQ9P1U1 418 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 CACNG4Q9UBN1 327 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 CDH7Q9ULB5 785 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 VWA7Q9Y334 891 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 DHRS12A0PJE2 317 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 IRAK2O43187 625 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
RTN4-204ENST00000357732 GPIP06744 558 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 GRIA3P42263 894 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 ZNF419Q96HQ0 510 aaPredicted RBP17.75■□□□□ 0.43
RTN4-204ENST00000357732 SLC39A8Q9C0K1 460 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 TNFRSF12AQ9NP84 129 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 RBM22Q9NW64 420 aaKnown RBP eCLIP17.75■□□□□ 0.43
RTN4-204ENST00000357732 ZNF839A8K0R7 811 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 SOCS2O14508 198 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 CLASP2O75122 1294 aaKnown RBP17.75■□□□□ 0.43
RTN4-204ENST00000357732 PMPCBO75439 489 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 TIPRLO75663 272 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 FGFR3P22607 806 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 FASP25445 335 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 SEPT6Q14141 434 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 KDELC1Q6UW63 502 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 CYHR1Q6ZMK1 362 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 CILP2Q8IUL8 1156 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 FUNDC1Q8IVP5 155 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 BBS5Q8N3I7 341 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 YTHDF1Q9BYJ9 559 aaKnown RBP17.75■□□□□ 0.43
RTN4-204ENST00000357732 OSBPL6Q9BZF3 934 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 MFSD1Q9H3U5 465 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
RTN4-204ENST00000357732 WASH4PA8MWX3 477 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 VPS4BO75351 444 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 MRPL19P49406 292 aaKnown RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 SERPINH1P50454 418 aaKnown RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 UGT3A2Q3SY77 523 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 TBCELQ5QJ74 424 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 GPR142Q7Z601 462 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 PTAR1Q7Z6K3 402 aaPredicted RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 FNDC8Q8TC99 324 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 CENPNQ96H22 339 aaPredicted RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 TINF2Q9BSI4 451 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 POPDC3Q9HBV1 291 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 A0A0J9YYE9 177 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 A0A1B0GTW7 788 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 KANSL1LA0AUZ9 987 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 ATP6V1B2P21281 511 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 CCR1P32246 355 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 EPHX2P34913 555 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 WNT3AP56704 352 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 NAA20P61599 178 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 MERTKQ12866 999 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 TMTC4Q5T4D3 741 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 TTC33Q6PID6 262 aaPredicted RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 MIER2Q8N344 545 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 PEX13Q92968 403 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 SLC10A4Q96EP9 437 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 ZNF512Q96ME7 567 aaPredicted RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 ADI1Q9BV57 179 aa17.74■□□□□ 0.43
RTN4-204ENST00000357732 UNKQ9C0B0 810 aaKnown RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 DNAAF2Q9NVR5 837 aaKnown RBP17.74■□□□□ 0.43
RTN4-204ENST00000357732 UBFD1O14562 309 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 ANGPT2O15123 496 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 SUPT7LO94864 414 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 CKMT2P17540 419 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 HDCP19113 662 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 GRIK2Q13002 908 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 SLC36A3Q495N2 470 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 PRAMEF19Q5SWL8 479 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 TWF2Q6IBS0 349 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 RAB44Q7Z6P3 723 aaPredicted RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 ISCA2Q86U28 154 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 GPR180Q86V85 440 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 RNF135Q8IUD6 432 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 RTL3Q8N8U3 475 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 SEPT8Q92599 483 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 TMIGD2Q96BF3 282 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 MYRFLQ96LU7 910 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 ZFP42Q96MM3 310 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 TRIM54Q9BYV2 358 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms