RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SERPINB7O75635 380 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 CRATP43155 626 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ERICH5Q6P6B1 374 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 FAM92BQ6ZTR7 304 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 OFCC1Q8IZS5 231 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 CSGALNACT1Q8TDX6 532 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 LRRN4Q8WUT4 740 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 HDAC10Q969S8 669 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLC12A4Q9UP95 1085 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GOLGA4Q13439 2230 aaKnown RBP11.77□□□□□ -0.52
COL9A1-202ENST00000357250 ENTPD5O75356 428 aa11.77□□□□□ -0.52
COL9A1-202ENST00000357250 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.52
COL9A1-202ENST00000357250 SLC22A3O75751 556 aa11.77□□□□□ -0.52
COL9A1-202ENST00000357250 RHOQP17081 205 aa11.77□□□□□ -0.52
COL9A1-202ENST00000357250 CCNCP24863 283 aa11.77□□□□□ -0.52
COL9A1-202ENST00000357250 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.52
COL9A1-202ENST00000357250 DDX18Q9NVP1 670 aaKnown RBP11.77□□□□□ -0.52
COL9A1-202ENST00000357250 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.52
COL9A1-202ENST00000357250 TLR5O60602 858 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 LRCH4O75427 683 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 GCATO75600 419 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 IL6P05231 212 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 CDC25CP30307 473 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 IL12RB1P42701 662 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 NRF1Q16656 503 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 CLNKQ7Z7G1 428 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 PQLC1Q8N2U9 271 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 PLD5Q8N7P1 536 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 GINS4Q9BRT9 223 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 RERGLQ9H628 205 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 BTBD3Q9Y2F9 522 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 PRMT5O14744 637 aaPredicted RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 SPTLC1O15269 473 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 RPP40O75818 363 aaKnown RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 AP2A1O95782 977 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 THOP1P52888 689 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 CDYL2Q8N8U2 506 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.53
COL9A1-202ENST00000357250 ERGIC3Q9Y282 383 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 AK5Q9Y6K8 562 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
COL9A1-202ENST00000357250 GSTT1P30711 240 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ABL2P42684 1182 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 OLR1P78380 273 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 GALNT18Q6P9A2 607 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 SPESP1Q6UW49 350 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 CUZD1Q86UP6 607 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 CLEC4DQ8WXI8 215 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 CPXM1Q96SM3 734 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 SAMD4AQ9UPU9 718 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 COQ4Q9Y3A0 265 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 MAFBQ9Y5Q3 323 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 TBL1XO60907 577 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 CYP7B1O75881 506 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 IPO13O94829 963 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ALOX12P18054 663 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 EPHA3P29320 983 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 L1CAMP32004 1257 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ABCG1P45844 678 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 USP46P62068 366 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ROR2Q01974 943 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 KLF10Q13118 480 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 FAM110CQ1W6H9 321 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 RGS21Q2M5E4 152 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF572Q7Z3I7 529 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 CACTIN-AS1Q8N1I8 211 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 BEND7Q8N7W2 519 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 DNAJB14Q8TBM8 379 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF607Q96SK3 696 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 REXO4Q9GZR2 422 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 KIAA1522Q9P206 1035 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 ABCC6O95255 1503 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 PAGE1O75459 146 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 PIAS1O75925 651 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 TM7SF2O76062 418 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 UMPSP11172 480 aa11.76□□□□□ -0.53
COL9A1-202ENST00000357250 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
COL9A1-202ENST00000357250 BNIP1Q12981 228 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms