RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TEX47Q8TBZ9 253 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 MTMR9Q96QG7 549 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FADS2P1A8MWK0 482 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 PITPNM1O00562 1244 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 DGKIO75912 1065 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 CHRNGP07510 517 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 UGT1A5P35504 534 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 GRIK2Q13002 908 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF284Q2VY69 593 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 EGFLAMQ63HQ2 1017 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 MEIOBQ8N635 442 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF232Q9UNY5 417 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 MON2Q7Z3U7 1717 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 SORL1Q92673 2214 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 SMIM22K7EJ46 135 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 DENRO43583 198 aaKnown RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 RPLP0P05388 317 aaKnown RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 EPCAMP16422 314 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 CHRM3P20309 590 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 GSTM3P21266 225 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ALDH4A1P30038 563 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 EFR3AQ14156 821 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF181Q2M3W8 571 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 DGKKQ5KSL6 1271 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 WDR59Q6PJI9 974 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 TXNRD3Q86VQ6 643 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 SCN4BQ8IWT1 228 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 BEND7Q8N7W2 519 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 COLGALT1Q8NBJ5 622 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 TRPV3Q8NET8 790 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 OR2T12Q8NG77 320 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 ADAM32Q8TC27 787 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 SLC4A5Q9BY07 1137 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 UNKLQ9H9P5 680 aaKnown RBP6.59□□□□□ -1.36
VPS13B-202ENST00000357162 GGT7Q9UJ14 662 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.36
VPS13B-202ENST00000357162 GSTT2P0CG29 244 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 CD40LGP29965 261 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 TLX1P31314 330 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SLC15A1P46059 708 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 CPT1AP50416 773 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 IST1P53990 364 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 LMBRD2Q68DH5 695 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 MAGEE2Q8TD90 523 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 ATXN7L3BQ96GX2 97 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PARK7Q99497 189 aaKnown RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 DPP3Q9NY33 737 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 EML1O00423 815 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 ACKR2O00590 384 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PIGNO95427 931 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 CYP19A1P11511 503 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PTPN3P26045 913 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 ATP12AP54707 1039 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 GTF2BQ00403 316 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 FBXO47Q5MNV8 452 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 MACC1Q6ZN28 852 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 NIPA2Q8N8Q9 360 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 POLR1EQ9GZS1 481 aaKnown RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 GJB4Q9NTQ9 266 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 IKZF3Q9UKT9 509 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 KCNK1O00180 336 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SULT2A1Q06520 285 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 STRADAQ7RTN6 431 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 CPNE2Q96FN4 548 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 DSN1Q9H410 356 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SP140LQ9H930 580 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 H3BN98 237 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PDCD5O14737 125 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PPP3CCP48454 512 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM159Q96B96 161 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SLC45A3Q96JT2 553 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF696Q9H7X3 374 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 ZFP57Q9NU63 452 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PTGES3LE9PB15 166 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 H7C2Y5 167 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 RAMP2O60895 175 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 MYBP10242 640 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PRPS2P11908 318 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 GRIA4P48058 902 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 LRRC20Q8TCA0 184 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 LBHD1Q9BQE6 289 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-202ENST00000357162 KCTD10Q9H3F6 313 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 CDHR5Q9HBB8 845 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 XPNPEP3Q9NQH7 507 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PCDHGB7Q9Y5F8 929 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PRORSD1PA6NEY8 169 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 TDGQ13569 410 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 C11orf65Q8NCR3 313 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 SLC44A5Q8NCS7 719 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 PCBD2Q9H0N5 130 aa6.58□□□□□ -1.36
VPS13B-202ENST00000357162 GRIP1Q9Y3R0 1128 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms