RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PDE4DIPQ5VU43 2346 aa21.52■■□□□ 1.04
TSPAN3-202ENST00000346495 CD3EAPO15446 510 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 TULP3O75386 442 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 HAUS5O94927 633 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 GSTA1P08263 222 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 TAC1P20366 129 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 CCNHP51946 323 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 USP10Q14694 798 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 AFTPHQ6ULP2 937 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 VITQ6UXI7 678 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 C12orf40Q86WS4 652 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 OR4L1Q8NH43 312 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 LRRC8CQ8TDW0 803 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 RIPOR3Q96MK2 946 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 S1PR5Q9H228 398 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 SUDS3Q9H7L9 328 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 ECT2Q9H8V3 914 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 CAB39LQ9H9S4 337 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 FBXO6Q9NRD1 293 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 CATSPERZQ9NTU4 200 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 A0A096LPK6 155 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 FAM95CA0A1B0GW59 222 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 OR51F1A6NGY5 319 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 STX7O15400 261 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 BNIP3LO60238 219 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 OGNP20774 298 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 RECQLP46063 649 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 CLCN5P51795 746 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 PPM1JQ5JR12 505 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 DPY19L3Q6ZPD9 716 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 MFSD6LQ8IWD5 586 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 SCG3Q8WXD2 468 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 MRGPRX3Q96LB0 322 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 ZNF641Q96N77 438 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 CIPCQ9C0C6 399 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 SUV39H2Q9H5I1 410 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 ANKRD6Q9Y2G4 727 aa21.51■■□□□ 1.03
TSPAN3-202ENST00000346495 A0A0J9YYE9 177 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 A0A1W2PQ67 120 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 WASH3PC4AMC7 463 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 TRBC1P01850 177 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 SLC4A1P02730 911 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 DLDP09622 509 aaKnown RBP21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 CTPS1P17812 591 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 SERPINB4P48594 390 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 CSRP3P50461 194 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 FCHO2Q0JRZ9 810 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 GRAMD4Q6IC98 578 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 CNSTQ6PJW8 725 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 Q6ZVU0 165 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 SDCCAG8Q86SQ7 713 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 SLC41A1Q8IVJ1 513 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 YAF2Q8IY57 180 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 CPA6Q8N4T0 437 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 ACVR1CQ8NER5 493 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 CYB5D2Q8WUJ1 264 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 ECHDC3Q96DC8 303 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 MYADMQ96S97 322 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 GPR63Q9BZJ6 419 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 ZDHHC6Q9H6R6 413 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 HPS4Q9NQG7 708 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 POLR3BQ9NW08 1133 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 MARCH4Q9P2E8 410 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 DEC1Q9P2X7 70 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 TLK1Q9UKI8 766 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 PHTF1Q9UMS5 762 aa21.5■■□□□ 1.03
TSPAN3-202ENST00000346495 S1PR4O95977 384 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 C2P06681 752 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 ALPIP09923 528 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 POU4F1Q01851 419 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 GAB4Q2WGN9 574 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 FASTKD1Q53R41 847 aaKnown RBP21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 TAF1BQ53T94 588 aaPredicted RBP21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 MICALCLQ6ZW33 695 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 RAPH1Q70E73 1250 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 ARMC2Q8NEN0 867 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 FRS2Q8WU20 508 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 SORCS1Q8WY21 1168 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 ELMO2Q96JJ3 720 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 C19orf43Q9BQ61 176 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 PKP3Q9Y446 797 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 MYO9BQ13459 2157 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 DOCK8Q8NF50 2099 aa21.49■■□□□ 1.03
TSPAN3-202ENST00000346495 WDR91A4D1P6 747 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 CAPN8A6NHC0 703 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 TBX10O75333 385 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 STMN1P16949 149 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 CRABP2P29373 138 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 MTHFRP42898 656 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 ZSCAN26Q16670 478 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 CTC1Q2NKJ3 1217 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 N4BP2L1Q5TBK1 243 aaPredicted RBP21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 LCA5Q86VQ0 697 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 GPATCH11Q8N954 259 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 OR2A12Q8NGT7 310 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 ZNF75CPQ92670 426 aaPredicted RBP21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 VOPP1Q96AW1 172 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 ELSPBP1Q96BH3 223 aa21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 CORO1CQ9ULV4 474 aaPredicted RBP21.48■■□□□ 1.03
TSPAN3-202ENST00000346495 KIAA1549LQ6ZVL6 1849 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms