RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 TRAFD1O14545 582 aaPredicted RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 FZD6O60353 706 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 RPP40O75818 363 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 UGT2B4P06133 528 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 ALPIP09923 528 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 LPOP22079 712 aaPredicted RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 ARCN1P48444 511 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 GAB4Q2WGN9 574 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 ZNF470Q6ECI4 717 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 TAX1BP1Q86VP1 789 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 CHST14Q8NCH0 376 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 MDGA1Q8NFP4 955 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 OR13C4Q8NGS5 318 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 OR2A12Q8NGT7 310 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 MDM1Q8TC05 714 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 DYDC1Q8WWB3 177 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 PEX13Q92968 403 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 SMIM14Q96QK8 99 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 HEPHQ9BQS7 1158 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 CPEB1Q9BZB8 566 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 SMG5Q9UPR3 1016 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 TNFRSF10AO00220 468 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 AURKAO14965 403 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 HTRA2O43464 458 aaPredicted RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 ITGA2BP08514 1039 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 F7P08709 466 aaPredicted RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 GUCY1A3Q02108 690 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 CTBP1Q13363 440 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 PTPRCAPQ14761 206 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 PTPRNQ16849 979 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 GDPD4Q6W3E5 623 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 PLPP6Q8IY26 295 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 ZNF366Q8N895 744 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 OR4K2Q8NGD2 314 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 ALKBH8Q96BT7 664 aaKnown RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 TBATAQ96M53 351 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 SRPK1Q96SB4 655 aaKnown RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 IQCGQ9H095 443 aaKnown RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 FNDC3AQ9Y2H6 1198 aaKnown RBP17.39■□□□□ 0.37
CLDN4-201ENST00000340958 PKP3Q9Y446 797 aa17.39■□□□□ 0.37
CLDN4-201ENST00000340958 A6NNZ2 444 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 SLC7A4O43246 635 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 KAT7O95251 611 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 APODP05090 189 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 PYGBP11216 843 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 CHN1P15882 459 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 ARNTP27540 789 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 OPRD1P41143 372 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 POLR2LP62875 67 aaKnown RBP17.38■□□□□ 0.37
CLDN4-201ENST00000340958 MESP2Q0VG99 397 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 HTR4Q13639 388 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 NAIF1Q69YI7 327 aaPredicted RBP17.38■□□□□ 0.37
CLDN4-201ENST00000340958 SERPINA13PQ6UXR4 307 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 DENND6AQ8IWF6 608 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 FRS2Q8WU20 508 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 RBBP8Q99708 897 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 MAGEE1Q9HCI5 957 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 INTS9Q9NV88 658 aaKnown RBP17.38■□□□□ 0.37
CLDN4-201ENST00000340958 IL36AQ9UHA7 158 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
CLDN4-201ENST00000340958 A0A1W2PQ67 120 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 FAM47DPA6NHR8 397 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 XPAP23025 273 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MDH1P40925 334 aaKnown RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 EIF2DP41214 584 aaKnown RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 ARSDP51689 593 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 CSE1LP55060 971 aaKnown RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 GNGT1P63211 74 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 PTPRRQ15256 657 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 ARSIQ5FYB1 569 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 EMC10Q5UCC4 262 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 USP45Q70EL2 814 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MZB1Q8WU39 189 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 SERAC1Q96JX3 654 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 KLHL32Q96NJ5 620 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 PAIP2Q9BPZ3 127 aaKnown RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MFSD1Q9H3U5 465 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MTG2Q9H4K7 406 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 SUDS3Q9H7L9 328 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 BPIFA1Q9NP55 256 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 NLE1Q9NVX2 485 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 POLR3BQ9NW08 1133 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 RIMKLBQ9ULI2 386 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 C1orf232A0A0U1RR37 186 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 A8MX80 341 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 LEFTY1O75610 366 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 GOT2P00505 430 aaKnown RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 TRBC1P01850 177 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 SAT1P21673 171 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 PMLP29590 882 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 HADHAP40939 763 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 GRIA2P42262 883 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 SLC1A2P43004 574 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms