RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LPCAT1Q8NF37 534 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 TADA1Q96BN2 335 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 MBNL1Q9NR56 388 aaKnown RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 UBP1Q9NZI7 540 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 TRHDEQ9UKU6 1024 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 FNDC3AQ9Y2H6 1198 aaKnown RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 LRP4O75096 1905 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 USP27XA6NNY8 438 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 TM4SF5O14894 197 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 PMPCBO75439 489 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 RECQL5O94762 991 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-201ENST00000340074 HEXIM1O94992 359 aaKnown RBP15.29■□□□□ 0.04
UBE3B-201ENST00000340074 GM2AP17900 193 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 LHCGRP22888 699 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 ID4P47928 161 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 RPL26P61254 145 aaKnown RBP15.29■□□□□ 0.04
UBE3B-201ENST00000340074 GALNT3Q14435 633 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 LRRC14Q15048 493 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 ACOX1Q15067 660 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 AGERQ15109 404 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 IRF4Q15306 451 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 SLC14A2Q15849 920 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 DENND2CQ68D51 928 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
UBE3B-201ENST00000340074 Q6ZSR6 202 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 SLC35B2Q8TB61 432 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 FAM174AQ8TBP5 190 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 TRIB3Q96RU7 358 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 RTKNQ9BST9 563 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 ADGRE3Q9BY15 652 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 USP29Q9HBJ7 922 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 DNPEPQ9ULA0 475 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 PYCARDQ9ULZ3 195 aa15.29■□□□□ 0.04
UBE3B-201ENST00000340074 RPL26L1Q9UNX3 145 aaKnown RBP15.29■□□□□ 0.04
UBE3B-201ENST00000340074 SPEGQ15772 3267 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 CAPN8A6NHC0 703 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ANKRD66B4E2M5 251 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 CXCR5P32302 372 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 IL9RQ01113 521 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ARHGEF7Q14155 803 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 PUM1Q14671 1186 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE3B-201ENST00000340074 QPCTQ16769 361 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 WSCD2Q2TBF2 565 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ANKRD20A2Q5SQ80 823 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ANKRD20A1Q5TYW2 823 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ANKRD20A3Q5VUR7 823 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 SLC22A18ASQ8N1D0 253 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ATG4AQ8WYN0 398 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 IFT43Q96FT9 208 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 FCRL5Q96RD9 977 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ELF4Q99607 663 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-201ENST00000340074 GBA3Q9H227 469 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 ERVMER34-1Q9H9K5 563 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 TM7SF3Q9NS93 570 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 RSPH14Q9UHP6 348 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 BPTFQ12830 3046 aa15.28■□□□□ 0.04
UBE3B-201ENST00000340074 DCDC2BA2VCK2 349 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 STK10O94804 968 aaKnown RBP15.27■□□□□ 0.04
UBE3B-201ENST00000340074 ZNF883P0CG24 379 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 RABIFP47224 123 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 PFN3P60673 137 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 CDK18Q07002 472 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 LRRC66Q68CR7 880 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 CRTC1Q6UUV9 634 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 KDELC1Q6UW63 502 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 HSD11B1LQ7Z5J1 315 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 CBARPQ8N350 705 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-201ENST00000340074 CCDC110Q8TBZ0 833 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-201ENST00000340074 COQ10AQ96MF6 247 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 TMEM121Q9BTD3 319 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 MLPHQ9BV36 600 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-201ENST00000340074 GPR27Q9NS67 375 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 FAM153AQ9UHL3 310 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 MYLKQ15746 1914 aa15.27■□□□□ 0.04
UBE3B-201ENST00000340074 CNOT1A5YKK6 2376 aaKnown RBP15.27■□□□□ 0.04
UBE3B-201ENST00000340074 A0A1B0GTQ1 180 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 LIASO43766 372 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 KIF5CO60282 957 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CEP104O60308 925 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 DFNA5O60443 496 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PCCBP05166 539 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CD59P13987 128 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ETV3P41162 512 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CCT8P50990 548 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 WNT3AP56704 352 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PTSQ03393 145 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SLC14A1Q13336 389 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PDE1CQ14123 709 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 INPP5AQ14642 412 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SHBQ15464 509 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SIX1Q15475 284 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 TPRG1LQ5T0D9 272 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ITPRIPL1Q6GPH6 555 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms