RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ADGRG5Q8IZF4 528 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 UNC5BQ8IZJ1 945 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ASB12Q8WXK4 309 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC7A6Q92536 515 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RBPMSQ93062 196 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NXPE3Q969Y0 559 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC4A9Q96Q91 983 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GGA3Q9NZ52 723 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ENOPH1Q9UHY7 261 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 KCNK7Q9Y2U2 307 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DAGLAQ9Y4D2 1042 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ACTL7AQ9Y615 435 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 IRS2Q9Y4H2 1338 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 EDC4Q6P2E9 1401 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MYO3AQ8NEV4 1616 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ERVH48-1M5A8F1 160 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PER2O15055 1255 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TADA2AO75478 443 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 VNN1O95497 513 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 APBB3O95704 486 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FABP1P07148 127 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF806P0C7X5 589 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 LIG4P49917 911 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CPT1AP50416 773 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPR143P51810 404 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ARHGDIAP52565 204 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 HSF2Q03933 536 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC18A2Q05940 514 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DBPQ10586 325 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RAPSNQ13702 412 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NFYCQ13952 458 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF273Q14593 569 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF174Q15697 407 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC1A5Q15758 541 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MAPK11Q15759 364 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GRK1Q15835 563 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CA9Q16790 459 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPAT3Q53EU6 434 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PPP1R26Q5T8A7 1209 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPRIN3Q6ZVF9 776 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 C16orf86Q6ZW13 317 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 USP49Q70CQ1 688 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DHFR2Q86XF0 187 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TBC1D10CQ8IV04 446 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SYTL1Q8IYJ3 562 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM102Q8N9M5 508 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC22A17Q8WUG5 538 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BTBD6Q96KE9 485 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF778Q96MU6 729 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SORT1Q99523 831 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 OCSTAMPQ9BR26 566 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RANBP3Q9H6Z4 567 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NMUR1Q9HB89 426 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CHMP1AQ9HD42 196 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FBXO6Q9NRD1 293 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SMYD2Q9NRG4 433 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TOPORSQ9NS56 1045 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MED9Q9NWA0 146 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF624Q9P2J8 865 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SH3BGRL2Q9UJC5 107 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TRAPPC4Q9Y296 219 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MYOM1P52179 1685 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 E5RI56 91 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PRMT3O60678 531 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DDAH1O94760 285 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TOP3BO95985 862 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RB1P06400 928 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MYL3P08590 195 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 IFIT1P09914 478 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ICAM2P13598 275 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FGL2Q14314 439 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BAK1Q16611 211 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BTBD16Q32M84 506 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CAMSAP1Q5T5Y3 1602 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 KIAA1614Q5VZ46 1190 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ALG1LQ6GMV1 187 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TRIM69Q86WT6 500 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SPATA6LQ8N4H0 392 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC35G2Q8TBE7 412 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF606Q8WXB4 792 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FOXJ1Q92949 421 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MYLPFQ96A32 169 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MRRFQ96E11 262 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 C19orf60Q96EN9 201 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BDH2Q9BUT1 245 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TRIM62Q9BVG3 475 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 UCK2Q9BZX2 261 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RNPEPQ9H4A4 650 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 OPA3Q9H6K4 179 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 COPS3Q9UNS2 423 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ERVK-19Q9WJR5 959 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RNF11Q9Y3C5 154 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ORC6Q9Y5N6 252 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 C2orf71A6NGG8 1288 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 POTEMA6NI47 508 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 MPTX1A8MV57 137 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 OGTO15294 1046 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CYP26A1O43174 497 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IFNA10P01566 189 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ZDHHC11BP0C7U3 371 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms