RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 VPS50Q96JG6 964 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 RNF186Q9NXI6 227 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 NEMP2A6NFY4 417 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 KLF11O14901 512 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 MAGEA11P43364 429 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 IL27RAQ6UWB1 636 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SCIMPQ6UWF3 145 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TRMT11Q7Z4G4 463 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CENPIQ92674 756 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TSGA13Q96PP4 275 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TM7SF2O76062 418 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 RPS24P62847 133 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 MPP1Q00013 466 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SLC18A2Q05940 514 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 EML3Q32P44 896 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 COPS7BQ9H9Q2 264 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 FNIP2Q9P278 1114 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SPASTQ9UBP0 616 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CCDC154A6NI56 674 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TRIM38O00635 465 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 HK2P52789 917 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 RBFAQ8N0V3 343 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PYDC1Q8WXC3 89 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CNTN5O94779 1100 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 POLD2P49005 469 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CHRNB3Q05901 458 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 FAM162AQ96A26 154 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 SEPHS2Q99611 448 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ADNPQ9H2P0 1102 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 GABRDO14764 452 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 AZIN1O14977 448 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CATP04040 527 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PIK3R1P27986 724 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PBLDP30039 288 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CDC25CP30307 473 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 FRG1Q14331 258 aaKnown RBP6.31□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF460Q14592 562 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 CNSTQ6PJW8 725 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 RINLQ6ZS11 566 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 TP53INP2Q8IXH6 220 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 HEXDCQ8WVB3 486 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 FEM1CQ96JP0 617 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 EBF4Q9BQW3 602 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 BBS2Q9BXC9 721 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 EPB41L4BQ9H329 900 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 PIF1Q9H611 641 aa6.31□□□□□ -1.4
PRKDC-202ENST00000338368 GOT2P00505 430 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 POLR2EP19388 210 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 OLIG2Q13516 323 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PEX6Q13608 980 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TBC1D19Q8N5T2 526 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 OR13C4Q8NGS5 318 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SKA1Q96BD8 255 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SMOC2Q9H3U7 446 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ASAH2Q9NR71 780 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 NDUFA13Q9P0J0 144 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 RGPD5Q99666 1765 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PFKMP08237 780 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF23P17027 643 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SERINC3Q13530 473 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MS4A13Q5J8X5 152 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 COPS8Q99627 209 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 FLRT1Q9NZU1 646 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SLC12A4Q9UP95 1085 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MTF2Q9Y483 593 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PSAT1Q9Y617 370 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 A8MUI8 341 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 INPP4BO15327 924 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 INSIG1O15503 277 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 RGS14O43566 566 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CHRNGP07510 517 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SP100P23497 879 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MAPK1P28482 360 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MSX2P35548 267 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 AAGABQ6PD74 315 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZBTB49Q6ZSB9 765 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CUZD1Q86UP6 607 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CLPTM1LQ96KA5 538 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SLC2A6Q9UGQ3 507 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 C15orf38-AP3S2A0A0A6YYH1 394 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SAC3D1A6NKF1 404 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MAGEC1O60732 1142 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SIN3BO75182 1162 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PSMC3P17980 439 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 EEF1DP29692 281 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 KCNQ1P51787 676 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 FAM151BQ6UXP7 276 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ARHGAP36Q6ZRI8 547 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ARPINQ7Z6K5 226 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ULK2Q8IYT8 1036 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF555Q8NEP9 628 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZSCAN18Q8TBC5 510 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms