RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 KIRREL3Q8IZU9 778 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 FRS2Q8WU20 508 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 CFAP36Q96G28 342 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
DDX39A-202ENST00000324340 TM6SF2Q9BZW4 377 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 LRMDAQ9H2I8 198 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ELOVL2Q9NXB9 296 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 EURLQ9NYK6 297 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 SLCO3A1Q9UIG8 710 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ANKRD36A6QL64 1941 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ZCWPW2A0A1B0GU75 182 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PRRT4C9JH25 899 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TRAFD1O14545 582 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RASGRF2O14827 1237 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 HTRA2O43464 458 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SOCS5O75159 536 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 FOSL2P15408 326 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 GCAP28676 217 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RASSF2P50749 326 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RPL26P61254 145 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 MESP2Q0VG99 397 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 GRM3Q14832 879 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 DLG2Q15700 870 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 LRRC23Q53EV4 343 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CARD16Q5EG05 197 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PKN3Q6P5Z2 889 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CAPN12Q6ZSI9 719 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 KDELC2Q7Z4H8 507 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TDRPQ86YL5 185 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SLC25A41Q8N5S1 370 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PPHLN1Q8NEY8 458 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 HLA-CQ95604 372 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PPP1R14BQ96C90 147 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CYTH2Q99418 400 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TRIM56Q9BRZ2 755 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PHF7Q9BWX1 381 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 ADGRE3Q9BY15 652 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TRIM4Q9C037 500 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TNKS2Q9H2K2 1166 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CHRAC1Q9NRG0 131 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 IRAK4Q9NWZ3 460 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SLC24A2Q9UI40 661 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CHKBQ9Y259 395 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TCAF1Q9Y4C2 921 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RPS6KL1Q9Y6S9 549 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TICRRQ7Z2Z1 1910 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 HEATR9A2RTY3 570 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 DPPA5A6NC42 116 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 MROH6A6NGR9 719 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 FAM159BA6NKW6 160 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 UNC5CO95185 931 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PGLSO95336 258 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 POP4O95707 220 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PDHA1P08559 390 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 KRT16P08779 473 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 NNMTP40261 264 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 KCNJ2P63252 427 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 KDSRQ06136 332 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 POU6F1Q14863 301 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 GSTA3Q16772 222 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 LONRF1Q17RB8 773 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 MYLK3Q32MK0 819 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 KBTBD12Q3ZCT8 623 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RIBC1Q8N443 379 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 OR2A12Q8NGT7 310 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 EPS8L3Q8TE67 593 aaKnown RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CYB5D2Q8WUJ1 264 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 SORCS1Q8WY21 1168 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PEX13Q92968 403 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 MFSD3Q96ES6 412 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 FCRL3Q96P31 734 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 VCX3BQ9H321 246 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 TREX1Q9NSU2 369 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 ABCF3Q9NUQ8 709 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 PDP2Q9P2J9 529 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 HECAQ9UBI9 543 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 LGALS13Q9UHV8 139 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 EVLQ9UI08 416 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-202ENST00000324340 RIMKLBQ9ULI2 386 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms