RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PIRTP0C851 137 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 CPA3P15088 417 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 ALDH3A1P30838 453 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 OCRLQ01968 901 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 BST1Q10588 318 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 PCLAFQ15004 111 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 LACTB2Q53H82 288 aaPredicted RBP17.87■□□□□ 0.45
RAB39A-201ENST00000320578 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 ASTLQ6HA08 431 aaPredicted RBP17.87■□□□□ 0.45
RAB39A-201ENST00000320578 FAM45BPQ6NSW5 357 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 TMEM184AQ6ZMB5 413 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 TRPM8Q7Z2W7 1104 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 AHI1Q8N157 1196 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 GBP7Q8N8V2 638 aaPredicted RBP17.87■□□□□ 0.45
RAB39A-201ENST00000320578 OR4K2Q8NGD2 314 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 OR6Y1Q8NGX8 325 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 FAM45AQ8TCE6 357 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 OSCP1Q8WVF1 389 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 SREK1Q8WXA9 508 aaKnown RBP17.87■□□□□ 0.45
RAB39A-201ENST00000320578 PPP2R3CQ969Q6 453 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 MECRQ9BV79 373 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 TRIM55Q9BYV6 548 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 POPDC3Q9HBV1 291 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 MARCH4Q9P2E8 410 aaPredicted RBP17.87■□□□□ 0.45
RAB39A-201ENST00000320578 VWA7Q9Y334 891 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 HOXC11O43248 304 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 KLHL2O95198 593 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 SERPINE1P05121 402 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 SERPINA4P29622 427 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 HMGCLP35914 325 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 STC1P52823 247 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 EPHB1P54762 984 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ECT2LQ008S8 904 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 STX3Q13277 289 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 MYLK3Q32MK0 819 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 PPP2R2DQ66LE6 453 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 C22orf39Q6P5X5 142 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 OTUD6BQ8N6M0 293 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 GPATCH11Q8N954 259 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 LYSMD1Q96S90 227 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 TM6SF2Q9BZW4 377 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 NKX2-4Q9H2Z4 354 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 TRPV4Q9HBA0 871 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 EVLQ9UI08 416 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 PPIL1Q9Y3C6 166 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 DOCK6Q96HP0 2047 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 GBF1Q92538 1859 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 AURKAO14965 403 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 PFDN6O15212 129 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 STX7O15400 261 aaKnown RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 F7P08709 466 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 FGF3P11487 239 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 SLC8A1P32418 973 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 IRF9Q00978 393 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF789Q5FWF6 425 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 RNF187Q5TA31 235 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 HECTD2Q5U5R9 776 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ADIPOR2Q86V24 386 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 CEP97Q8IW35 865 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 CENPLQ8N0S6 344 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 WFIKKN2Q8TEU8 576 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 PDCD6IPQ8WUM4 868 aaKnown RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 C10orf82Q8WW14 230 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ING5Q8WYH8 240 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF641Q96N77 438 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 GPR78Q96P69 363 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 SUDS3Q9H7L9 328 aaPredicted RBP17.86■□□□□ 0.45
RAB39A-201ENST00000320578 GDE1Q9NZC3 331 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 IL17CQ9P0M4 197 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF711Q9Y462 761 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 WNT6Q9Y6F9 365 aa17.86■□□□□ 0.45
RAB39A-201ENST00000320578 A0A0J9YYE9 177 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 WASH3PC4AMC7 463 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 PHGDHO43175 533 aaKnown RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 WISP3O95389 354 aaPredicted RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 POP4O95707 220 aaKnown RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 TRBC1P01850 177 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 ABL2P42684 1182 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 CTSOP43234 321 aaPredicted RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 SUOXP51687 545 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 RAD51Q06609 339 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 CBX2Q14781 532 aaPredicted RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 DHCR24Q15392 516 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 CARD16Q5EG05 197 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 CAMK1DQ8IU85 385 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 TMEM151AQ8N4L1 468 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 VN1R2Q8NFZ6 395 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 TTC8Q8TAM2 541 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 ECHDC3Q96DC8 303 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 GDF15Q99988 308 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 SIKE1Q9BRV8 207 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF358Q9NW07 568 aa17.85■□□□□ 0.45
RAB39A-201ENST00000320578 DUS2Q9NX74 493 aaKnown RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 RUVBL2Q9Y230 463 aaKnown RBP17.85■□□□□ 0.45
RAB39A-201ENST00000320578 OR51F1A6NGY5 319 aa17.84■□□□□ 0.45
RAB39A-201ENST00000320578 G3V2L1 256 aa17.84■□□□□ 0.45
RAB39A-201ENST00000320578 BUD23O43709 281 aaKnown RBP17.84■□□□□ 0.45
RAB39A-201ENST00000320578 ADH1CP00326 375 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms