RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 UBXN11Q5T124 520 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 RBM20Q5T481 1227 aaKnown RBP13.89□□□□□ -0.19
MKS1-201ENST00000313863 KLHL35Q6PF15 583 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 ZNF354CQ86Y25 554 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 ARHGAP12Q8IWW6 846 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
MKS1-201ENST00000313863 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 EDEM1Q92611 657 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 ARNT2Q9HBZ2 717 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 AGPAT4Q9NRZ5 378 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 FNIP2Q9P278 1114 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 VWA7Q9Y334 891 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 IPPQ9Y573 584 aa13.89□□□□□ -0.19
MKS1-201ENST00000313863 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
MKS1-201ENST00000313863 A0A0J9YYE9 177 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 RNF103-CHMP3A0A140T963 221 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 TRIM64A6NGJ6 449 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 SAC3D1A6NKF1 404 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 SLC7A4O43246 635 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 SNAP91O60641 907 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 MAFKO60675 156 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 SUPT7LO94864 414 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
MKS1-201ENST00000313863 HDCP19113 662 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 HOXC13P31276 330 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 ZNF678Q5SXM1 525 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 HECTD2Q5U5R9 776 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 GPRIN1Q7Z2K8 1008 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
MKS1-201ENST00000313863 ZMIZ2Q8NF64 920 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 TSPEARQ8WU66 669 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 PHF21BQ96EK2 531 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 PCED1BQ96HM7 432 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 KATNBL1Q9H079 304 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 TBC1D23Q9NUY8 699 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 FAIMQ9NVQ4 179 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 RBM22Q9NW64 420 aaKnown RBP eCLIP13.88□□□□□ -0.19
MKS1-201ENST00000313863 SMOXQ9NWM0 555 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 AURKCQ9UQB9 309 aa13.88□□□□□ -0.19
MKS1-201ENST00000313863 TYW5A2RUC4 315 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 MBLAC1A4D2B0 266 aaPredicted RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 NR5A2O00482 541 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 NOL3O60936 208 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 CBFA2T3O75081 653 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 MATN4O95460 622 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 FGF4P08620 206 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SMIM10L2AP0DMW4 78 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SMIM10L2BP0DMW5 78 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 KCNA5P22460 613 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 EPHX2P34913 555 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 HERVK_113P63132 956 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 ABRAXAS1Q6UWZ7 409 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SMYD1Q8NB12 490 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 PNPT1Q8TCS8 783 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 MRGPRX2Q96LB1 330 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 OLFM1Q99784 485 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 ERVK-6Q9BXR3 956 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 HHLA1C9JL84 531 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 RASAL1O95294 804 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 UMPSP11172 480 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 BAG6P46379 1132 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SERPINH1P50454 418 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 IQSEC1Q6DN90 963 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 BHLHA9Q7RTU4 235 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SPRED1Q7Z699 444 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 TRPV3Q8NET8 790 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 DQX1Q8TE96 717 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 BORCS5Q969J3 196 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 C12orf43Q96C57 262 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 VPS50Q96JG6 964 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 CNDP2Q96KP4 475 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 MYRFLQ96LU7 910 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 TRIM54Q9BYV2 358 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 TMEM9Q9P0T7 183 aa13.87□□□□□ -0.19
MKS1-201ENST00000313863 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
MKS1-201ENST00000313863 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.86□□□□□ -0.19
MKS1-201ENST00000313863 PLOD2O00469 737 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 NME4O00746 187 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 GIPC1O14908 333 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CLOCKO15516 846 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 SMPD1P17405 629 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 YWHAQP27348 245 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 PLK1P53350 603 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CDH15P55291 814 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 WNT3AP56704 352 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 NAA20P61599 178 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms