RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 C11orf24Q96F05 449 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-201ENST00000310441 SEMA4BQ9NPR2 832 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-201ENST00000310441 TRAFD1O14545 582 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-201ENST00000310441 ORC5O43913 435 aa15.52■□□□□ 0.07
HCFC1-201ENST00000310441 NOS1APO75052 506 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-201ENST00000310441 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.073e-8■■■□□ 18.2
HCFC1-201ENST00000310441 C1orf189Q5VU69 101 aa15.52■□□□□ 0.07
HCFC1-201ENST00000310441 TAPT1Q6NXT6 567 aa15.52■□□□□ 0.07
HCFC1-201ENST00000310441 ELP6Q0PNE2 266 aa15.52■□□□□ 0.07
HCFC1-201ENST00000310441 RCOR3Q9P2K3 495 aaPredicted RBP15.52■□□□□ 0.07
HCFC1-201ENST00000310441 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ENDOD1O94919 500 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SLC7A2P52569 658 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 IL18R1Q13478 541 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CHKAP35790 457 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 NT5DC1Q5TFE4 455 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SOCS4Q8WXH5 440 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CPNE2Q96FN4 548 aaPredicted RBP15.51■□□□□ 0.07
HCFC1-201ENST00000310441 DEFB129Q9H1M3 183 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 STARD7Q9NQZ5 370 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ADAMDEC1O15204 470 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ASGR1P07306 291 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ANPEPP15144 967 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SNX20Q7Z614 316 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ETNK2Q9NVF9 386 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 TAS2R7Q9NYW3 318 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 GRB10Q13322 594 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CRTC3Q6UUV7 619 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 LRRC69Q6ZNQ3 347 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SCGB3A2Q96PL1 93 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 COMMD4Q9H0A8 199 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 RAB23Q9ULC3 237 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 PDHA2P29803 388 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CNSTQ6PJW8 725 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 GPR180Q86V85 440 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 LGI2Q8N0V4 545 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SPATA20Q8TB22 786 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CCDC107Q8WV48 283 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 KPNA3O00505 521 aaPredicted RBP15.51■□□□□ 0.07
HCFC1-201ENST00000310441 RGS10O43665 173 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CPTPQ5TA50 214 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CLP1Q92989 425 aaKnown RBP15.51■□□□□ 0.07
HCFC1-201ENST00000310441 EHD1Q9H4M9 534 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 RBM47A0AV96 593 aaKnown RBP15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SNAP23O00161 211 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 HDAC3O15379 428 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 VTNP04004 478 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 CLUP10909 449 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ATP13A4Q4VNC1 1196 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SLCO6A1Q86UG4 719 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF563Q8TA94 476 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SLC4A9Q96Q91 983 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 LOXHD1Q8IVV2 1947 aa15.51■□□□□ 0.07
HCFC1-201ENST00000310441 SSTR1P30872 391 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PPP2R2BQ00005 443 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 GIPC3Q8TF64 312 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 SLC28A2O43868 658 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 CSF1RP07333 972 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 CCNB1P14635 433 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 MTX3Q5HYI7 312 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 SPESP1Q6UW49 350 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 RBM44Q6ZP01 1051 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 SV2AQ7L0J3 742 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TAS1R2Q8TE23 839 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 ZC3H10Q96K80 434 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 NXF3Q9H4D5 531 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PCDHGA10Q9Y5H3 936 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FGF1P05230 155 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 RB1P06400 928 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 POLNQ7Z5Q5 900 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 AKAP3O75969 853 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PLK1P53350 603 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 MANFP55145 182 aaKnown RBP15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PSMD5Q16401 504 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FAAH2Q6GMR7 532 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 GRHL2Q6ISB3 625 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 ZDHHC6Q9H6R6 413 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 ABHD14A-ACY1A0A1B0GW23 586 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 CBX6O95503 412 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FAM153BP0C7A2 387 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 SLC20A2Q08357 652 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 AMIGO1Q86WK6 493 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PHF12Q96QT6 1004 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PRRG4Q9BZD6 226 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TKTL2Q9H0I9 626 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 EMC3Q9P0I2 261 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 MBD5Q9P267 1494 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FAM205CA6NFA0 338 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 PKNOX1P55347 436 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 FOLH1Q04609 750 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 NFIXQ14938 502 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 MPPE1Q53F39 396 aa15.5■□□□□ 0.07
HCFC1-201ENST00000310441 TSEN15Q8WW01 171 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms