RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 UBASH3BQ8TF42 649 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SEMA4DQ92854 862 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 A0A087X0B3 334 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 KHDRBS3O75525 346 aaKnown RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 KLHL18O94889 574 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 BUD31P41223 144 aaPredicted RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 GRIA4P48058 902 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SPATA9Q9BWV2 254 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 EHD3Q9NZN3 535 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SAMD4AQ9UPU9 718 aaKnown RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 MED1Q15648 1581 aaPredicted RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 IDH2P48735 452 aaKnown RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 LHX5Q9H2C1 402 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SERPINA6P08185 405 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 FAM171BQ6P995 826 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SNX7Q9UNH6 387 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 STX16-NPEPL1H3BU86 382 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 STX16O14662 325 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 RARAP10276 462 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 GLRA2P23416 452 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 PLK1P53350 603 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 NAIF1Q69YI7 327 aaPredicted RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 UXS1Q8NBZ7 420 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 OR52K1Q8NGK4 314 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 LOC100506127A0A0U1RQW1 187 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SSNA1O43805 119 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 FGBP02675 491 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 CHRNGP07510 517 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 GIMD1P0DJR0 217 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 ZNF846Q147U1 533 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 GCNT7Q6ZNI0 430 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 CCDC80Q76M96 950 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 JAZF1Q86VZ6 243 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 SLC30A8Q8IWU4 369 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 IRGQQ8WZA9 623 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 CDRT15Q96T59 188 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 MCEMP1Q8IX19 187 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 ZNF354BQ96LW1 612 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 KCNS3Q9BQ31 491 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 LRIG2O94898 1065 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 MMP3P08254 477 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 ERCC2P18074 760 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 LPIN1Q14693 890 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 PPCDCQ96CD2 204 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 MAGEL2Q9UJ55 1249 aa11.34□□□□□ -0.59
VCPIP1-201ENST00000310421 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TSC22D2O75157 780 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PRKAR1AP10644 381 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TCF4P15884 667 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RBL1P28749 1068 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PTPN9P43378 593 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ENPEPQ07075 957 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 NINJ2Q9NZG7 142 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TFR2Q9UP52 801 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 C5orf60A6NFR6 353 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 F8VP50 259 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SELPP16109 830 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SSTR1P30872 391 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 GSSP48637 474 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ERICH5Q6P6B1 374 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 AP2M1Q96CW1 435 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PANX1Q96RD7 426 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RHBDL2Q9NX52 303 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RAP2CQ9Y3L5 183 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CCDC88CQ9P219 2028 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SLIT2O94813 1529 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PLK4O00444 970 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 LRRC19Q9H756 370 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 COG5Q9UP83 839 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 BBS12Q6ZW61 710 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PTGR2Q8N8N7 351 aaPredicted RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PIH1D2Q8WWB5 315 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RHBGQ9H310 441 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PLSCR1O15162 318 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 GRM5P41594 1212 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PRR5P85299 388 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CACNG1Q06432 222 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TUSC3Q13454 348 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms