RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 BTN2A2Q8WVV5 523 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 TSACCQ96A04 125 aaPredicted RBP19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 PDXPQ96GD0 296 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 SEMA3CQ99985 751 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 LGR4Q9BXB1 951 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 USP29Q9HBJ7 922 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 SPASTQ9UBP0 616 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 PHTF1Q9UMS5 762 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 ADAMTS20P59510 1910 aa19.88■□□□□ 0.77
PDZRN3-202ENST00000308537 A0A0U1RQS6 177 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 A0A1W2PQ67 120 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 TMEM202A6NGA9 273 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 YY2O15391 372 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 LCA5LO95447 670 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 CPP00450 1065 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 PRLP01236 227 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 HLA-DQB2P05538 268 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 GP1BAP07359 652 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 JUPP14923 745 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 CCNCP24863 283 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 ARHGAP25P42331 645 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 KIAA1024LP59773 190 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 PPARDQ03181 441 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 NIPAL4Q0D2K0 466 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 IFI16Q16666 785 aaKnown RBP19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 FAM182AQ5T1J6 154 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 GUSBP11Q6P575 273 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 TSPAN33Q86UF1 283 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 VSIG1Q86XK7 387 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 RHOT2Q8IXI1 618 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 SLC35F3Q8IY50 421 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 HDAC11Q96DB2 347 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 SCRN2Q96FV2 425 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 FGF22Q9HCT0 170 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 INTUQ9ULD6 942 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 RAI2Q9Y5P3 530 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 NBEAQ8NFP9 2946 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 PTPRQQ9UMZ3 2332 aa19.87■□□□□ 0.77
PDZRN3-202ENST00000308537 EME2A4GXA9 379 aaPredicted RBP19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 OPA1O60313 960 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 HOXC4P09017 264 aaPredicted RBP19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 VIPR1P32241 457 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 E2F1Q01094 437 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 DSC2Q02487 901 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 RTP5Q14D33 572 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 C6orf132Q5T0Z8 1188 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 LRRC38Q5VT99 294 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 ENPP7Q6UWV6 458 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 HSD11B1LQ7Z5J1 315 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 BBS5Q8N3I7 341 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 CNTD1Q8N815 330 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 PDCD6IPQ8WUM4 868 aaKnown RBP19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 OR1E3Q8WZA6 343 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 DTD2Q96FN9 168 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 WDR92Q96MX6 357 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 OLFM3Q96PB7 478 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 POLR1EQ9GZS1 481 aaKnown RBP19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 AMACRQ9UHK6 382 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 CLCA2Q9UQC9 943 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 HYOU1Q9Y4L1 999 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 DGKBQ9Y6T7 804 aa19.86■□□□□ 0.77
PDZRN3-202ENST00000308537 FUCA1P04066 466 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 MMP2P08253 660 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 TPM1P09493 284 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 ALPIP09923 528 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 HNF1BP35680 557 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 HADHBP55084 474 aaKnown RBP19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 SRP54P61011 504 aaKnown RBP19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 TAZQ16635 292 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 CDKN3Q16667 212 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 PERM1Q5SV97 790 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 FAXCQ5TGI0 409 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 RFLNAQ6ZTI6 216 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 TECPR1Q7Z6L1 1165 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 HID1Q8IV36 788 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 MAP7D3Q8IWC1 876 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 IFI44Q8TCB0 444 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 NSMCE1Q8WV22 266 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 LGMNQ99538 433 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 IL12RB2Q99665 862 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 TDRD1Q9BXT4 1180 aaKnown RBP19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 RBM22Q9NW64 420 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 RAXQ9Y2V3 346 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 GPSM3Q9Y4H4 160 aa19.85■□□□□ 0.77
PDZRN3-202ENST00000308537 CACNA1GO43497 2377 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 LRRD1A4D1F6 860 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 PSMD11O00231 422 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 MT-CO3P00414 261 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 SOD1P00441 154 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 CCNB1P14635 433 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 TGM2P21980 687 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 FECHP22830 423 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 ETV3P41162 512 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 PPIDQ08752 370 aaKnown RBP19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 ZBTB17Q13105 803 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 ACOX1Q15067 660 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 TSR1Q2NL82 804 aaKnown RBP19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 HS1BP3Q53T59 392 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 ARMC12Q5T9G4 340 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 TIGD7Q6NT04 549 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms