RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PCDHGC4Q9Y5F7 938 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 ANKRD66B4E2M5 251 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 RFPL2O75678 378 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 MT-CO1P00395 513 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 T-ENOLP0DO92 83 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 FDXRP22570 491 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 SLC26A3P40879 764 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 GLRBP48167 497 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CSNK1DP48730 415 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 AQP5P55064 265 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CAMK1Q14012 370 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 TECRLQ5HYJ1 363 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 LIPMQ5VYY2 423 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 TBC1D1Q86TI0 1168 aaPredicted RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 LDB1Q86U70 411 aaPredicted RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CMTM8Q8IZV2 173 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 TTC8Q8TAM2 541 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 RIN3Q8TB24 985 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 PPP4R1Q8TF05 950 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 BHMTQ93088 406 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 NXNL1Q96CM4 212 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 TCEAL4Q96EI5 215 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 UBXN10Q96LJ8 280 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 MRPL57Q9BQC6 102 aaKnown RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 SMG9Q9H0W8 520 aaKnown RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 LRMDAQ9H2I8 198 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 MRPL46Q9H2W6 279 aaKnown RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 INTS10Q9NVR2 710 aaKnown RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 HACD3Q9P035 362 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 KIAA1522Q9P206 1035 aaPredicted RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CPSF2Q9P2I0 782 aaKnown RBP10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CLEC4EQ9ULY5 219 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 CCL26Q9Y258 94 aa10.2□□□□□ -0.78
C9orf43-201ENST00000288462 C2orf81A6NN90 581 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ARHGEF15O94989 841 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 CSPG5O95196 566 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 POU2F2P09086 479 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 HNRNPA1P09651 372 aaKnown RBP eCLIP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PTPN2P17706 415 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 LPOP22079 712 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 CD70P32970 193 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 GRIA4P48058 902 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 SUOXP51687 545 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 CDKN2DP55273 166 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TEAD2Q15562 447 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PLEKHG6Q3KR16 790 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ATXN7L2Q5T6C5 722 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ZNF549Q6P9A3 640 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 MAVSQ7Z434 540 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 METTL3Q86U44 580 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 WDR75Q8IWA0 830 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PNPLA1Q8N8W4 532 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 LEMD2Q8NC56 503 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TTC16Q8NEE8 873 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 OR4K2Q8NGD2 314 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 HEXDCQ8WVB3 486 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 KLHL29Q96CT2 875 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 MYO19Q96H55 970 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PRR11Q96HE9 360 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 SCYL1Q96KG9 808 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 SMIM14Q96QK8 99 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 GATA5Q9BWX5 397 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 FAM96AQ9H5X1 160 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 POPDC3Q9HBV1 291 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ARHGEF3Q9NR81 526 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ABCB8Q9NUT2 735 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 POLR3BQ9NW08 1133 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 INTS6Q9UL03 887 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 VWA7Q9Y334 891 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 K7ERQ8 282 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 FCHO1O14526 889 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ZNF195O14628 629 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 HNRNPCL1O60812 293 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 CLASP2O75122 1294 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PGLSO95336 258 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PENKP01210 267 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 CYBBP04839 570 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 RHOP08100 348 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 LTA4HP09960 611 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 KITP10721 976 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 NQO1P15559 274 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TARSP26639 723 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 IRS1P35568 1242 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 MAPK8P45983 427 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TIAL1Q01085 375 aaKnown RBP eCLIP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 USP4Q13107 963 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TUBB3Q13509 450 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 KRT72Q14CN4 511 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 SLC5A9Q2M3M2 681 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ARHGAP15Q53QZ3 475 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 PRSS36Q5K4E3 855 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 FBXW10Q5XX13 1052 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 TPGS1Q6ZTW0 290 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 ALYREFQ86V81 257 aaKnown RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 INPP5DQ92835 1189 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 USP13Q92995 863 aaPredicted RBP10.19□□□□□ -0.78
C9orf43-201ENST00000288462 NMUR2Q9GZQ4 415 aa10.19□□□□□ -0.78
C9orf43-201ENST00000288462 DRC3Q9H069 523 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms