RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 VPS33AQ96AX1 596 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SPATA16Q9BXB7 569 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 USP29Q9HBJ7 922 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM105AQ9NUU6 356 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 BTN3A1O00481 513 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SERPINF2P08697 491 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SOAT1P35610 550 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 NAB1Q13506 487 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SEMA5AQ13591 1074 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 MTX3Q5HYI7 312 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 CLEC6AQ6EIG7 209 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 C11orf88Q6PI97 169 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 EFL1Q7Z2Z2 1120 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 FBXO39Q8N4B4 442 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 FBXO30Q8TB52 745 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 RSPH1Q8WYR4 309 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PPP1R10Q96QC0 940 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ACOX2Q99424 681 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SEMA3CQ99985 751 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PRELID1Q9Y255 219 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 BCORQ6W2J9 1755 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 C2orf81A6NN90 581 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PPP3CCP48454 512 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 TPTEP56180 551 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC10A2Q12908 348 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 GALNT3Q14435 633 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 LSM12Q3MHD2 195 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 GALNT18Q6P9A2 607 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 LGI2Q8N0V4 545 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC35F5Q8WV83 523 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 OR52B2Q96RD2 323 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 MIPEPQ99797 713 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 RHOJQ9H4E5 214 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 BPIFA1Q9NP55 256 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PSMD13Q9UNM6 376 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PMF1-BGLAPU3KQ54 211 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 STX16-NPEPL1H3BU86 382 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 AP2A1O95782 977 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ATP5F1P24539 256 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 LIMK2P53671 638 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 AQP4P55087 323 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ENPEPQ07075 957 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 KLHL12Q53G59 568 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PITRM1Q5JRX3 1037 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 CDCA2Q69YH5 1023 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 SPESP1Q6UW49 350 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 GATAD2AQ86YP4 633 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 CFAP52Q8N1V2 620 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 TCAIMQ8N3R3 496 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 TUBGCP5Q96RT8 1024 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 OSBPL11Q9BXB4 747 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 MOSPD1Q9UJG1 213 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 FZD10Q9ULW2 581 aa12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 EIF3LQ9Y262 564 aaKnown RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 GPC6Q9Y625 555 aaPredicted RBP12.59□□□□□ -0.39
SLC6A1-201ENST00000287766 PRRG1O14668 218 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 LTA4HP09960 611 aaKnown RBP12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 NOMO2Q5JPE7 1267 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 TMEM26Q6ZUK4 368 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 RPS27LQ71UM5 84 aaKnown RBP12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 PAGE2Q7Z2X7 111 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 FSTL5Q8N475 847 aaPredicted RBP12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 SPPL2AQ8TCT8 520 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 POMPQ9Y244 141 aa12.58□□□□□ -0.39
SLC6A1-201ENST00000287766 DDX60LQ5H9U9 1706 aaKnown RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TMEM233B4DJY2 109 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 MAGEC1O60732 1142 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 VPS26AO75436 327 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 RFPL1O75677 317 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 CABYRO75952 493 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 MT-ND1P03886 318 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SERPIND1P05546 499 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 GSTM1P09488 218 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 MYL4P12829 197 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 OXCT1P55809 520 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 NDUFA5Q16718 116 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms