RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D10AQ9BXI6 508 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 DDX28Q9NUL7 540 aaKnown RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PACSIN3Q9UKS6 424 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PRRC2BQ5JSZ5 2229 aaKnown RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 A0A0U1RQF3 1178 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ARVCFO00192 962 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 FAM155BO75949 473 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ANXA6P08133 673 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 MAPKAPK2P49137 400 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 SEMA5AQ13591 1074 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 SPIDRQ14159 915 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CERS6Q6ZMG9 384 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ASZ1Q8WWH4 475 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PROX1Q92786 737 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ACAT2Q9BWD1 397 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 DTLQ9NZJ0 730 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 LZTS1Q9Y250 596 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GLYATL1P3A0A0U1RQE8 302 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ISM1B1AKI9 464 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 NTSP30990 170 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GSSP48637 474 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PSME3P61289 254 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GRB14Q14449 540 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ASTE1Q2TB18 679 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CIR1Q86X95 450 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 KRT73Q86Y46 540 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GPR156Q8NFN8 814 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 STYXQ8WUJ0 223 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PYDC1Q8WXC3 89 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TMEM216Q9P0N5 145 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PLLPQ9Y342 182 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 NRP1O14786 923 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 HS6ST1O60243 411 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 F2P00734 622 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 FAM58BPP0C7Q3 252 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CXCR3P49682 368 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 HECTD2Q5U5R9 776 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 FBXO30Q8TB52 745 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 USP7Q93009 1102 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 SMAD5Q99717 465 aaKnown RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 ABCG8Q9H221 673 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 ANAPC2Q9UJX6 822 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 TRAF6Q9Y4K3 522 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 H3BN98 237 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CACNB4O00305 520 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 ACRP10323 421 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 WASP42768 502 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 DEFA1P59665 94 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 DEFA3P59666 94 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 NCF4Q15080 339 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CA9Q16790 459 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 FAM124AQ86V42 546 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 HEXDCQ8WVB3 486 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 DLG3Q92796 817 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 PSMG2Q969U7 264 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 NMUR1Q9HB89 426 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 LRCH1Q9Y2L9 728 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 A0A1W2PQ67 120 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 GNRH1P01148 92 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 COL6A2P12110 1019 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 PTPN2P17706 415 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 FECHP22830 423 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CRATP43155 626 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 NDST2P52849 883 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 GPR180Q86V85 440 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CD101Q93033 1021 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 SPACA7Q96KW9 195 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 TCF25Q9BQ70 676 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms