RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CDK17Q00537 523 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 CYP4F3Q08477 520 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
LRTM1-201ENST00000273286 HS1BP3Q53T59 392 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 EFHC1Q5JVL4 640 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 SYPL2Q5VXT5 272 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 RAP1GAP2Q684P5 730 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 C19orf48Q6RUI8 117 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 DHRS13Q6UX07 377 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 LAYNQ6UX15 382 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 RRAGAQ7L523 313 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
LRTM1-201ENST00000273286 CCAR2Q8N163 923 aaKnown RBP9.91□□□□□ -0.82
LRTM1-201ENST00000273286 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 FAM169BQ8N8A8 192 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 ALG3Q92685 438 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
LRTM1-201ENST00000273286 CNDP2Q96KP4 475 aaKnown RBP9.91□□□□□ -0.82
LRTM1-201ENST00000273286 KRTAP4-2Q9BYR5 136 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 FBLN5Q9UBX5 448 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 SLCO3A1Q9UIG8 710 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 PAXBP1Q9Y5B6 917 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
LRTM1-201ENST00000273286 E5RJQ4 531 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 KCNK3O14649 394 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 FFAR3O14843 346 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 MCF2LO15068 1137 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 THAP12O43422 761 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PLRG1O43660 514 aaKnown RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 HSF2BPO75031 334 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 CLDN11O75508 207 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 LETM1O95202 739 aaPredicted RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 CKMT2P17540 419 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PAMP19021 973 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PAK1Q13153 545 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PDCLQ13371 301 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 KCNJ12Q14500 433 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 STAT4Q14765 748 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 SETMARQ53H47 684 aaPredicted RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 CCDC157Q569K6 752 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 SFMBT2Q5VUG0 894 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 STK40Q8N2I9 435 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 AADATQ8N5Z0 425 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 NELFBQ8WX92 580 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 ZNF606Q8WXB4 792 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 KAT5Q92993 513 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 SEC16BQ96JE7 1060 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 RPL10LQ96L21 214 aaKnown RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 RPRD1AQ96P16 312 aaPredicted RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 INTS2Q9H0H0 1204 aaKnown RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 MTG2Q9H4K7 406 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 FAM204AQ9H8W3 233 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PREBQ9HCU5 417 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 RRN3Q9NYV6 651 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 APEX2Q9UBZ4 518 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 NBEAQ8NFP9 2946 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 TP53BP1Q12888 1972 aaPredicted RBP9.9□□□□□ -0.82
LRTM1-201ENST00000273286 PLXNA2O75051 1894 aa9.9□□□□□ -0.82
LRTM1-201ENST00000273286 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ANKRD34BA5PLL1 514 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 PRAMEF26H0Y7S4 382 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 RRP8O43159 456 aaKnown RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 WNT1P04628 370 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 PDGFRAP16234 1089 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 DRD3P35462 400 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ACADVLP49748 655 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 KRT83P78385 493 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 E2F1Q01094 437 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 IL9RQ01113 521 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ZNF177Q13360 481 aaPredicted RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 RTP5Q14D33 572 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 SOWAHCQ53LP3 525 aaPredicted RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 KLHL10Q6JEL2 608 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ZDHHC17Q8IUH5 632 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ARHGEF19Q8IW93 802 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 APCDD1Q8J025 514 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 FRS2Q8WU20 508 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 MYEOVQ96EZ4 313 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 SLC2A13Q96QE2 648 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 PRMT1Q99873 361 aaKnown RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 ACBD3Q9H3P7 528 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 EBF2Q9HAK2 575 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 UBE2TQ9NPD8 197 aaPredicted RBP9.9□□□□□ -0.83
LRTM1-201ENST00000273286 DDIT4Q9NX09 232 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 CYTH4Q9UIA0 394 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 MAN1B1Q9UKM7 699 aa9.9□□□□□ -0.83
LRTM1-201ENST00000273286 NYNRINQ9P2P1 1898 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 ASXL3Q9C0F0 2248 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 GTPBP10A4D1E9 387 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 FAM149AA5PLN7 773 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms