RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 TDRD5Q8NAT2 981 aaKnown RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 CALML6Q8TD86 181 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 PPP4R1Q8TF05 950 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 BTBD10Q9BSF8 475 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 DRC3Q9H069 523 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 GPAMQ9HCL2 828 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 MED16Q9Y2X0 877 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 DIAPH2O60879 1101 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 LUC7L3O95232 432 aaKnown RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 CALB2P22676 271 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 POLD2P49005 469 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 PLK1P53350 603 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 SETMARQ53H47 684 aaPredicted RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 EPGNQ6UW88 154 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 TMC7Q7Z402 723 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 HERC6Q8IVU3 1022 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 PHTF2Q8N3S3 785 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 PDCD6IPQ8WUM4 868 aaKnown RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 EID2BQ96D98 161 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 TMA16Q96EY4 203 aaKnown RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 NUDCD1Q96RS6 583 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 WDR55Q9H6Y2 383 aaPredicted RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 CYP4F12Q9HCS2 524 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 DNAJC28Q9NX36 388 aa23.2■■□□□ 1.3
RAB40B-201ENST00000269347 DNMT3BQ9UBC3 853 aaKnown RBP23.2■■□□□ 1.3
RAB40B-201ENST00000269347 NOTCH4Q99466 2003 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 TMEM114B3SHH9 223 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 GRID2O43424 1007 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 ZBTB14O43829 449 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 ESRRAP11474 423 aaPredicted RBP23.19■■□□□ 1.3
RAB40B-201ENST00000269347 GKP32189 559 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 ABL2P42684 1182 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 PPP3CCP48454 512 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 POU5F2Q8N7G0 328 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 MRPL46Q9H2W6 279 aaKnown RBP23.19■■□□□ 1.3
RAB40B-201ENST00000269347 RETREG1Q9H6L5 497 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 BPIFA1Q9NP55 256 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 CCL26Q9Y258 94 aa23.19■■□□□ 1.3
RAB40B-201ENST00000269347 GOLGA8QA0A0J9YX86 632 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GOLGA8OA6NCC3 632 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 MEI4A8MW99 385 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GOLGA8NF8WBI6 632 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 CXCL14O95715 111 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 NCEH1Q6PIU2 408 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 FBXO46Q6PJ61 603 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 TPGS1Q6ZTW0 290 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 FAM217AQ8IXS0 508 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 OR4L1Q8NH43 312 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 TTC8Q8TAM2 541 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 RDH11Q8TC12 318 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 PTERQ96BW5 349 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 DENND2DQ9H6A0 471 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 TLR9Q9NR96 1032 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 CFAP97Q9P2B7 532 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GALPQ9UBC7 116 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 NKX1-2Q9UD57 310 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 VPS28Q9UK41 221 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 ANKRD12Q6UB98 2062 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 A0A087X1B8 175 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GLP2RO95838 553 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 C8AP07357 584 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 HTRA4P83105 476 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 PEX6Q13608 980 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 RFTN1Q14699 578 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GLT6D1Q7Z4J2 308 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 GALNT7Q86SF2 657 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 PIANPQ8IYJ0 282 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 TMEM199Q8N511 208 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 RBM15BQ8NDT2 890 aaKnown RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 VOPP1Q96AW1 172 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 CCDC97Q96F63 343 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 SLC46A2Q9BY10 475 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 TM6SF2Q9BZW4 377 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 FAM96AQ9H5X1 160 aa23.18■■□□□ 1.3
RAB40B-201ENST00000269347 NLE1Q9NVX2 485 aaPredicted RBP23.18■■□□□ 1.3
RAB40B-201ENST00000269347 CCL16O15467 120 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 CCDC22O60826 627 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 CA5AP35218 305 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 SLC12A2P55011 1212 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 BBS5Q8N3I7 341 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 NAT14Q8WUY8 206 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 TCEAL4Q96EI5 215 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 RAB3IPQ96QF0 476 aaPredicted RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 IL23AQ9NPF7 189 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 IKZF3Q9UKT9 509 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 UNC80Q8N2C7 3258 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 MTCL1Q9Y4B5 1905 aaKnown RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 B2RBV5 119 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 E9PBE3 544 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 KLHL41O60662 606 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 APOA4P06727 396 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 CKMP06732 381 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 HNRNPLP14866 589 aaKnown RBP eCLIP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 FDXRP22570 491 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 PSAPL1Q6NUJ1 521 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 CCNYL1Q8N7R7 359 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 EFHBQ8N7U6 833 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 GPR150Q8NGU9 434 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 TSNARE1Q96NA8 513 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms