RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SPNS2Q8IVW8 549 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 ADGRE3Q9BY15 652 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
CCDC40-201ENST00000269318 KLC4Q9NSK0 619 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 CATSPERZQ9NTU4 200 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 ARL8BQ9NVJ2 186 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 PRKAG2Q9UGJ0 569 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 ARHGAP26Q9UNA1 814 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 K7ERQ8 282 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 TLL1O43897 1013 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 MGRN1O60291 552 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 DLX3O60479 287 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 RHOAP61586 193 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 RALGPS1Q5JS13 557 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 ZNF549Q6P9A3 640 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 OR4K2Q8NGD2 314 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 TTC8Q8TAM2 541 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 SPPL3Q8TCT6 385 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 HERVK_113Q902F9 699 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 MRPL57Q9BQC6 102 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 C2orf49Q9BVC5 232 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 DRC3Q9H069 523 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 CORO1CQ9ULV4 474 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 CAPN14A8MX76 684 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 HNRNPCL1O60812 293 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 CSPG5O95196 566 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 SLC8A1P32418 973 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 GRIA4P48058 902 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 KPNA2P52292 529 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 STC1P52823 247 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 TIAL1Q01085 375 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 CSHL1Q14406 222 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 FAM45BPQ6NSW5 357 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 TMEM207Q6UWW9 146 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 ZNF781Q8N8C0 355 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 FAM45AQ8TCE6 357 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 ANKRD49Q8WVL7 239 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 UTP4Q969X6 686 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 TUBB6Q9BUF5 446 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 UNKQ9C0B0 810 aaKnown RBP16.66■□□□□ 0.26
CCDC40-201ENST00000269318 GPAMQ9HCL2 828 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 DNAJC28Q9NX36 388 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 PLK2Q9NYY3 685 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 CRYL1Q9Y2S2 319 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 SLC4A7Q9Y6M7 1214 aa16.66■□□□□ 0.26
CCDC40-201ENST00000269318 C2orf81A6NN90 581 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 MOSPD3O75425 235 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 HSPA4LO95757 839 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 EN2P19622 333 aaPredicted RBP16.65■□□□□ 0.26
CCDC40-201ENST00000269318 FDXRP22570 491 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 SLC26A3P40879 764 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 RASSF2P50749 326 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 LMAN2Q12907 356 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 TECRLQ5HYJ1 363 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 RETSATQ6NUM9 610 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 AFTPHQ6ULP2 937 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 TPGS1Q6ZTW0 290 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 FIBINQ8TAL6 211 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 PHOSPHO2Q8TCD6 241 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 SH3RF2Q8TEC5 729 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 ACDQ96AP0 544 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 MOCOSQ96EN8 888 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 LMLNQ96KR4 655 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 FAM96AQ9H5X1 160 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 TLR9Q9NR96 1032 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 ARMCX1Q9P291 453 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 ANKRD36A6QL64 1941 aa16.65■□□□□ 0.26
CCDC40-201ENST00000269318 SMAD6O43541 496 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 CCDC22O60826 627 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 RFPL2O75678 378 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 SERPINA6P08185 405 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 LTA4HP09960 611 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PRSS56P0CW18 603 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 LPOP22079 712 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 HNRNPH1P31943 449 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 IDH3AP50213 366 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 SUOXP51687 545 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 AP1S1P61966 158 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 AGAP9Q5VTM2 703 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 TTC30BQ8N4P2 665 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 RIN3Q8TB24 985 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 SCG3Q8WXD2 468 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 TCEAL4Q96EI5 215 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 NSL1Q96IY1 281 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 CDH19Q9H159 772 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 INTS10Q9NVR2 710 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 KIAA1522Q9P206 1035 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 CHRNGP07510 517 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms