RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NR2F1P10589 423 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 NDUFA5Q16718 116 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 OR6K2Q8NGY2 324 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
NEK4-201ENST00000233027 MAGEC3Q8TD91 643 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 ITCHQ96J02 903 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 CPXM1Q96SM3 734 aa13.41□□□□□ -0.26
NEK4-201ENST00000233027 KCNU1A8MYU2 1149 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MSI1O43347 362 aaKnown RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 FARP2O94887 1054 aaPredicted RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 FGRP09769 529 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 PRKG2Q13237 762 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 GNA13Q14344 377 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 RFX4Q33E94 735 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 IQSEC1Q6DN90 963 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 SLCO6A1Q86UG4 719 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 KBTBD8Q8NFY9 601 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MFSD11O43934 449 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 HECTD3Q5T447 861 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 DENND5AQ6IQ26 1287 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 TXNDC11Q6PKC3 985 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 GPR180Q86V85 440 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CFAP52Q8N1V2 620 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MOSPD2Q8NHP6 518 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 FAR1Q8WVX9 515 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 VWA7Q9Y334 891 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 ARIH1Q9Y4X5 557 aaPredicted RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CD48P09326 243 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MTHFRP42898 656 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 PTPN5P54829 565 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 UGT2B15P54855 530 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 CXCL17Q6UXB2 119 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 RNF19BQ6ZMZ0 732 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.26
NEK4-201ENST00000233027 CMTM6Q9NX76 183 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 ROBO3Q96MS0 1386 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 KHDRBS3O75525 346 aaKnown RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 BNIP1Q12981 228 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 TAF13Q15543 124 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 FBXO48Q5FWF7 155 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CPT1BQ92523 772 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 NXNL1Q96CM4 212 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 SIN3BO75182 1162 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CDH3P22223 829 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 CXorf40AQ8TE69 158 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 Q96MT0 163 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 C2orf49Q9BVC5 232 aaPredicted RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 THG1LQ9NWX6 298 aaKnown RBP13.4□□□□□ -0.26
NEK4-201ENST00000233027 MAT2BQ9NZL9 334 aa13.4□□□□□ -0.26
NEK4-201ENST00000233027 C9JVG2 144 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 PLOD3O60568 738 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 WNT3AP56704 352 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 RNASE12Q5GAN4 147 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DEPDC4Q8N2C3 294 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 ZNF232Q9UNY5 417 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 STX11O75558 287 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DPYSQ14117 519 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 CLEC6AQ6EIG7 209 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 RHBDF2Q6PJF5 856 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DENND6AQ8IWF6 608 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 CERKQ8TCT0 537 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 QRFPRQ96P65 431 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 ATP13A3Q9H7F0 1226 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 GNEQ9Y223 722 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 STON1Q9Y6Q2 735 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DPPA5A6NC42 116 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 SPATA31C2B4DYI2 1134 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 MT-ND1P03886 318 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 ITGA2P17301 1181 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 AQP1P29972 269 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 BIKQ13323 160 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 MADCAM1Q13477 382 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 HECTD2Q5U5R9 776 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 MON1BQ7L1V2 547 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 C16orf62Q7Z3J2 963 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 S100ZQ8WXG8 99 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 CD101Q93033 1021 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 SLC38A2Q96QD8 506 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 MRPL9Q9BYD2 267 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms