RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 NOL11Q9H8H0 719 aaKnown RBP13.62□□□□□ -0.23
RAB3D-201ENST00000222120 NMUR1Q9HB89 426 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 TRIM38O00635 465 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 PHEXP78562 749 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 ALFQ53S48 1182 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 MILR1Q7Z6M3 343 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 TMEM135Q86UB9 458 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 ZBTB46Q86UZ6 589 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 GPSM1Q86YR5 675 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 CEP97Q8IW35 865 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 IRGQQ8WZA9 623 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 BTN2A3PQ96KV6 586 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 FBRSL1Q9HCM7 1045 aaKnown RBP13.62□□□□□ -0.23
RAB3D-201ENST00000222120 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
RAB3D-201ENST00000222120 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 SH3BP1Q9Y3L3 701 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 TLL2Q9Y6L7 1015 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 SYCE1LA8MT33 242 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 NRP2O60462 931 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 GOT2P00505 430 aaKnown RBP13.62□□□□□ -0.23
RAB3D-201ENST00000222120 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 SEMG2Q02383 582 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 HNRNPDQ14103 355 aaKnown RBP13.62□□□□□ -0.23
RAB3D-201ENST00000222120 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 FAM45BPQ6NSW5 357 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 FBXL22Q6P050 247 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 FAM45AQ8TCE6 357 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 MPP4Q96JB8 637 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 TBCDQ9BTW9 1192 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 EMCNQ9ULC0 261 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 KIAA1217Q5T5P2 1943 aa13.62□□□□□ -0.23
RAB3D-201ENST00000222120 C15orf38-AP3S2A0A0A6YYH1 394 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 AZIN1O14977 448 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PARNO95453 639 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SPATA31D3P0C874 917 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 LBPP18428 481 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 MLLT6P55198 1093 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 FKBP1BP68106 108 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 DLG1Q12959 904 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SPATA31D4Q6ZUB0 917 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SLC24A5Q71RS6 500 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ARPINQ7Z6K5 226 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 COPG1Q9Y678 874 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 MCM3APO60318 1980 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ZCWPW2A0A1B0GU75 182 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PCNAP12004 261 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 RHOQP17081 205 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 KCNQ1P51787 676 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 TRIM32Q13049 653 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 TIGD2Q4W5G0 525 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 STXBP5Q5T5C0 1151 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 EPGNQ6UW88 154 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PRSS55Q6UWB4 352 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 CLYBLQ8N0X4 340 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ENDOVQ8N8Q3 282 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 KCTD14Q9BQ13 255 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 DCUN1D5Q9BTE7 237 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PRPF19Q9UMS4 504 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 MYO7AQ13402 2215 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 A0A088AWK7 358 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 A0A0J9YYE9 177 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HMX2A2RU54 273 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SNNO75324 88 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HIST1H2AGP0C0S8 130 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HIST1H2ADP20671 130 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 IL2P60568 153 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SQLEQ14534 574 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SFT2D3Q587I9 215 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 FAM126BQ8IXS8 530 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 TXNDC5Q8NBS9 432 aaKnown RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 SNX19Q92543 992 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HIST1H2AHQ96KK5 128 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 GPR21Q99679 349 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 HIST1H2AJQ99878 128 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 H2AFJQ9BTM1 129 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 TRIM54Q9BYV2 358 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ZNHIT2Q9UHR6 403 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PHIPQ8WWQ0 1821 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 ZNF865P0CJ78 1059 aaPredicted RBP13.61□□□□□ -0.23
RAB3D-201ENST00000222120 COL6A2P12110 1019 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 PPP1R3AQ16821 1122 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 UPP1Q16831 310 aa13.61□□□□□ -0.23
RAB3D-201ENST00000222120 CWF19L1Q69YN2 538 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms