RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LRRC74BQ6ZQY2 392 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 RINLQ6ZS11 566 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ULK2Q8IYT8 1036 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 RDH11Q8TC12 318 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ING5Q8WYH8 240 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
SMPD3-201ENST00000219334 FER1L4A9Z1Z3 1794 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ENO4A6NNW6 628 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PRMT5O14744 637 aaPredicted RBP18.99■□□□□ 0.63
SMPD3-201ENST00000219334 SNRPB2P08579 225 aaKnown RBP18.99■□□□□ 0.63
SMPD3-201ENST00000219334 HGFP14210 728 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ANXA8L1Q5VT79 327 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 RSBN1Q5VWQ0 802 aaPredicted RBP18.99■□□□□ 0.63
SMPD3-201ENST00000219334 TRIM40Q6P9F5 258 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ZNF671Q8TAW3 534 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PDZD7Q9H5P4 517 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ZDHHC4Q9NPG8 344 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 C5orf60A6NFR6 353 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PDE9AO76083 593 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 CLCNKBP51801 687 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 TCEAL5Q5H9L2 206 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 GALNT13Q8IUC8 556 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ACBD6Q9BR61 282 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 BTRCQ9Y297 605 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 COLEC10Q9Y6Z7 277 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 TEX28O15482 410 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 EOMESO95936 686 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 ICAM3P32942 547 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 ARMC4Q5T2S8 1044 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PDZK1Q5T2W1 519 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 METTL21AQ8WXB1 218 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PTGES3LE9PB15 166 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PTPN9P43378 593 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 IDH2P48735 452 aaKnown RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PKNOX1P55347 436 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PRKG2Q13237 762 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PLA2G4EQ3MJ16 856 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 ALKBH2Q6NS38 261 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 SIX5Q8N196 739 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 KCTD5Q9NXV2 234 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 COG5Q9UP83 839 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PAPSS1O43252 624 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 CILPO75339 1184 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 RASGRP1O95267 797 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 HNRNPH1P31943 449 aaKnown RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 TAF8Q7Z7C8 310 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 EIF1ADQ8N9N8 165 aaKnown RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 LRRN4Q8WUT4 740 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PANX1Q96RD7 426 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 SH3GL3Q99963 347 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 POLMQ9NP87 494 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 SAR1AQ9NR31 198 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 MTF2Q9Y483 593 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PCDHB1Q9Y5F3 818 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 RAI2Q9Y5P3 530 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 BTNL10A8MVZ5 291 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 MGRN1O60291 552 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 CCNYL3P0C7X3 344 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 ITPKBP27987 946 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 TPP2P29144 1249 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 TMED10P49755 219 aaKnown RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 SCIMPQ6UWF3 145 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 JOSD2Q8TAC2 188 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 PPCDCQ96CD2 204 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 MAT2BQ9NZL9 334 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 RCOR3Q9P2K3 495 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-201ENST00000219334 SORCS3Q9UPU3 1222 aa18.98■□□□□ 0.63
SMPD3-201ENST00000219334 APLFQ8IW19 511 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-201ENST00000219334 UXS1Q8NBZ7 420 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 SLC38A2Q96QD8 506 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 FAM237AA0A1B0GTK4 181 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 EPS8Q12929 822 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 DLG3Q92796 817 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 XPR1Q9UBH6 696 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 AZIN1O14977 448 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 TSPAN8P19075 237 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 GAD2Q05329 585 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 GRSF1Q12849 480 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMPD3-201ENST00000219334 IL17AQ16552 155 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 TEX44Q53QW1 395 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 ZNF607Q96SK3 696 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 TRIM43BA6NCK2 446 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 MCIDASD6RGH6 385 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 E9PAM4 449 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 ABHD2P08910 425 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 HTR7P34969 479 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 TAS2R40P59535 323 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 IZUMO1Q8IYV9 350 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 BAP1Q92560 729 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 AP2M1Q96CW1 435 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 AARSD1Q9BTE6 412 aaKnown RBP18.97■□□□□ 0.63
SMPD3-201ENST00000219334 RPP40O75818 363 aaKnown RBP18.97■□□□□ 0.63
SMPD3-201ENST00000219334 SPAM1P38567 509 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 PLEKHA7Q6IQ23 1121 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 RFWD3Q6PCD5 774 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 OFCC1Q8IZS5 231 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 MTMR14Q8NCE2 650 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 DBF4BQ8NFT6 615 aa18.97■□□□□ 0.63
SMPD3-201ENST00000219334 A0A1B0GVM2 712 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms