RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TLL2Q9Y6L7 1015 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 M0QZQ0 153 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 SUPT7LO94864 414 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 S1PR4O95977 384 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 GPX3P22352 226 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 YWHAQP27348 245 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 SLC7A2P52569 658 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 SLC5A3P53794 718 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 CDKN2DP55273 166 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 USP46P62068 366 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 TUBA4AP68366 448 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 PTAR1Q7Z6K3 402 aaPredicted RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 CLYBLQ8N0X4 340 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 PACRGLQ8N7B6 248 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 GOLM1Q8NBJ4 401 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 FAM81AQ8TBF8 368 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 CCT7Q99832 543 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 HOPXQ9BPY8 73 aaPredicted RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 TMEM79Q9BSE2 394 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 OCEL1Q9H607 264 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
SRP54-201ENST00000216774 MPP6Q9NZW5 540 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 MYRFQ9Y2G1 1151 aa13.34□□□□□ -0.27
SRP54-201ENST00000216774 H3BNH8 94 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TNFRSF10BO14763 440 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 B3GAT3O94766 335 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 FGF4P08620 206 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 CD86P42081 329 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 ALDH3B2P48448 385 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 TSPY1Q01534 308 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TNK2Q07912 1038 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 CYTH1Q15438 398 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 HMBOX1Q6NT76 420 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 CYP2R1Q6VVX0 501 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 SCD5Q86SK9 330 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 C14orf80Q86SX3 495 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 FUNDC1Q8IVP5 155 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 OR9I1Q8NGQ6 314 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 HM13Q8TCT9 377 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 CIB1Q99828 191 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 NOL11Q9H8H0 719 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 ABCD2Q9UBJ2 740 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 AK5Q9Y6K8 562 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 AQP12BA6NM10 295 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 HTRA2O43464 458 aaPredicted RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 ALDOCP09972 364 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 SLC5A2P31639 672 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 SPATS1Q496A3 300 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 MARC1Q5VT66 337 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 LAYNQ6UX15 382 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 ZBTB49Q6ZSB9 765 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 ERMP1Q7Z2K6 904 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 AQP12AQ8IXF9 295 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 OR6P1Q8NGX9 317 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TRPC4APQ8TEL6 797 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 RMND5BQ96G75 393 aaPredicted RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 TCF12Q99081 682 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 SLC29A1Q99808 456 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 NT5MQ9NPB1 228 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 CCM2LQ9NUG4 571 aaPredicted RBP13.33□□□□□ -0.28
SRP54-201ENST00000216774 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 NDUFAF1Q9Y375 327 aa13.33□□□□□ -0.28
SRP54-201ENST00000216774 TRMUO75648 421 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 MOCS2O96007 188 aaPredicted RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 MMP2P08253 660 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 SLC2A3P11169 496 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 RHOQP17081 205 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 FDXRP22570 491 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 FGFR3P22607 806 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 KCNC1P48547 511 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 ATP6V0D1P61421 351 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 PRAMEP78395 509 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 NHSL2Q5HYW2 709 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 MINDY1Q8N5J2 469 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 PEX13Q92968 403 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 HDAC10Q969S8 669 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 TADA1Q96BN2 335 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 C3orf30Q96M34 536 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms