RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 IQCKQ8N0W5 287 aa13.6□□□□□ -0.23
SF3A1-201ENST00000215793 DHX33Q9H6R0 707 aaKnown RBP13.6□□□□□ -0.23
SF3A1-201ENST00000215793 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
SF3A1-201ENST00000215793 MAGEL2Q9UJ55 1249 aa13.6□□□□□ -0.23
SF3A1-201ENST00000215793 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
SF3A1-201ENST00000215793 SLC27A6Q9Y2P4 619 aa13.6□□□□□ -0.23
SF3A1-201ENST00000215793 OR10H2O60403 315 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 IL1BP01584 269 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 TSPAN8P19075 237 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 MC4RP32245 332 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 JOSD2Q8TAC2 188 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 LPPQ93052 612 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 TEFMQ96QE5 360 aaKnown RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 OR52E6Q96RD3 313 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 EPB41L1Q9H4G0 881 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 ZNHIT2Q9UHR6 403 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PAPSS1O43252 624 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 RGS1Q08116 209 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 UGCGQ16739 394 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PTPN20Q4JDL3 420 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PRAMEF19Q5SWL8 479 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 C9orf57Q5W0N0 161 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SCIMPQ6UWF3 145 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 VSTM1Q6UX27 236 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 HIPK1Q86Z02 1210 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 FIBCD1Q8N539 461 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 IGFLR1Q9H665 355 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SOHLH2Q9NX45 425 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PCDHGA4Q9Y5G9 962 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 C5orf60A6NFR6 353 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 C2P06681 752 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 GSTT1P30711 240 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PBX1P40424 430 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 ZDHHC20Q5W0Z9 365 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 GPR156Q8NFN8 814 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 RNASE11Q8TAA1 199 aaKnown RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 BTN2A3PQ96KV6 586 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PTGFRNQ9P2B2 879 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 FBXL21Q9UKT6 434 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 ATXN2Q99700 1313 aaKnown RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 CLDN5O00501 218 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PRMT5O14744 637 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 TPP2P29144 1249 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SLC7A2P52569 658 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 KCTD21Q4G0X4 260 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PPTC7Q8NI37 304 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PTCD2Q8WV60 388 aaKnown RBP13.59□□□□□ -0.23
SF3A1-201ENST00000215793 SLC44A1Q8WWI5 657 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 ZHX1-C8orf76Q96EF9 292 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 RTKNQ9BST9 563 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 LRRC4CQ9HCJ2 640 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 C8orf4Q9NR00 106 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 PACSIN3Q9UKS6 424 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 N6AMT1Q9Y5N5 214 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
SF3A1-201ENST00000215793 WWP2O00308 870 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 PAGE1O75459 146 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.23
SF3A1-201ENST00000215793 HNMTP50135 292 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 ABRQ12979 859 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 CMC1Q7Z7K0 106 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 TBC1D21Q8IYX1 336 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 RGL4Q8IZJ4 473 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 OMA1Q96E52 524 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.23
SF3A1-201ENST00000215793 ASF1AQ9Y294 204 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 COQ6Q9Y2Z9 468 aa13.58□□□□□ -0.23
SF3A1-201ENST00000215793 SUV39H1O43463 412 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 OR10H3O60404 316 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 NRP2O60462 931 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 ERN1O75460 977 aaKnown RBP13.58□□□□□ -0.24
SF3A1-201ENST00000215793 SLC25A14O95258 325 aaPredicted RBP13.58□□□□□ -0.24
SF3A1-201ENST00000215793 LINC00032P0C843 101 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 SLC6A2P23975 617 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 CDC25CP30307 473 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 RHAGQ02094 409 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 GALNT3Q14435 633 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 KLHL12Q53G59 568 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 MFSD5Q6N075 450 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 RNF44Q7L0R7 432 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 FNDC11Q9BVV2 318 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 KIAA1522Q9P206 1035 aaPredicted RBP13.58□□□□□ -0.24
SF3A1-201ENST00000215793 A0A1W2PPM1 405 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 ERAL1O75616 437 aaKnown RBP13.58□□□□□ -0.24
SF3A1-201ENST00000215793 NR2F6P10588 404 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 HTR7P34969 479 aa13.58□□□□□ -0.24
SF3A1-201ENST00000215793 CRHR1P34998 444 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms