RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 LIPMQ5VYY2 423 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 GLT6D1Q7Z4J2 308 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 TBC1D1Q86TI0 1168 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 C7orf61Q8IZ16 206 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 MDGA1Q8NFP4 955 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 NXNL1Q96CM4 212 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 OLFM1Q99784 485 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 MAN1C1Q9NR34 630 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 ARHGEF3Q9NR81 526 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 ABCB8Q9NUT2 735 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 DNAJC16Q9Y2G8 782 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 FCF1Q9Y324 198 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 OR51F1A6NGY5 319 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 H7C0S8 307 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 CCL22O00626 93 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 TRAFD1O14545 582 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 XYLBO75191 536 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 RASSF9O75901 435 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 SNUPNO95149 360 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 MT-CO1P00395 513 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 RHOP08100 348 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 PIRTP0C851 137 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 T-ENOLP0DO92 83 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 FDXRP22570 491 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 SERPINB3P29508 390 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 ARRB2P32121 409 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 GRIA4P48058 902 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 STC1P52823 247 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 ASPHQ12797 758 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 KRT72Q14CN4 511 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 FAM83EQ2M2I3 478 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 AGAP9Q5VTM2 703 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 RNF135Q8IUD6 432 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 TTC30BQ8N4P2 665 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 ZNF557Q8N988 423 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 INPP5DQ92835 1189 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 NDNQ99608 321 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 C17orf80Q9BSJ5 609 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 GATA5Q9BWX5 397 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 SUDS3Q9H7L9 328 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 MAGEE1Q9HCI5 957 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 HAO1Q9UJM8 370 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 NUMBLQ9Y6R0 609 aa14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 HELZP42694 1942 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-201ENST00000023939 TK2O00142 265 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 HTRA2O43464 458 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 SOCS5O75159 536 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 LYPLA1O75608 230 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 PGLSO95336 258 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 LTA4HP09960 611 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 HK2P52789 917 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 AQP5P55064 265 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 DNAJB13P59910 316 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF460Q14592 562 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 PTPRCAPQ14761 206 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 TEAD2Q15562 447 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 PRSS36Q5K4E3 855 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 NAPRTQ6XQN6 538 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 ATG14Q6ZNE5 492 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 OR4K2Q8NGD2 314 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 HEXDCQ8WVB3 486 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 STON2Q8WXE9 905 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 KLHL29Q96CT2 875 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 TCEAL4Q96EI5 215 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 SCYL1Q96KG9 808 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 DRC3Q9H069 523 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 LRMDAQ9H2I8 198 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 DNAJC28Q9NX36 388 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 ZDHHC7Q9NXF8 308 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 CPSF2Q9P2I0 782 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 XPR1Q9UBH6 696 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 DPP7Q9UHL4 492 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 INTS6Q9UL03 887 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 CLEC4EQ9ULY5 219 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
RTFDC1-201ENST00000023939 GRM6O15303 877 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 BUD23O43709 281 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CCDC22O60826 627 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 RFPL2O75678 378 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 RBP1P09455 135 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 CD70P32970 193 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 SERPINB5P36952 375 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 RASSF2P50749 326 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 SEMA3AQ14563 771 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ACAP2Q15057 778 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 TECRLQ5HYJ1 363 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ARMC12Q5T9G4 340 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 ZNF549Q6P9A3 640 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
RTFDC1-201ENST00000023939 LDB1Q86U70 411 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms